| QTL Map Information |
|---|
| Chromosome: | 7 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
40.3-40.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs2711209528 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
VARIANCE | 2.351% | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | LOC110527932 (cytochrome b-c1 complex subunit 1, mitochondrial-like) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Fish were diploid females from a growth-selected line. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped using an Affymetrix 50K SNP chip and analyzed for filet shear force and protein content. |
| Analysis: | GWAS was performed using weighted single-step GBLUP with a mixed model. |
| Software: | AIREMLF90, POSTGSF90, PLINK |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Ali A, Al-Tobasei R, Lourenco D, Leeds T, Kenney B, Salem M |
| Affiliation: | Computational Science Program, Middle Tennessee State University, Murfreesboro, TN, United States |
| Title: | Genome-Wide Association Study Identifies Genomic Loci Affecting Filet Firmness and Protein Content in Rainbow Trout |
| Journal: | Frontiers in genetics, 2019, 10: 386 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Reported peak marker=AX-171615203; |
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