| QTL Map Information |
|---|
| Chromosome: | 10 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
|
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs3029785434 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
VARIANCE | 1.298% | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #258881
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Fish were from a rainbow trout growth-selected line from NCCCWA. |
| Breeds associated:
n/a
|
| Design: | Fish were genotyped with a custom 50K transcribed SNP chip, and GWAS was performed for fillet color traits. A total of 32,868 SNPs were used for analysis. |
| Analysis: | GWAS was performed using weighted single-step GBLUP with a single-trait animal model. |
| Software: | AIREMLF90, BLUPF90 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Ahmed RO, Ali A, Al-Tobasei R, Leeds T, Kenney B, Salem M |
| Affiliation: | Department of Animal and Avian Sciences, University of Maryland, College Park, MD 20742, USA |
| Title: | Weighted Single-Step GWAS Identifies Genes Influencing Fillet Color in Rainbow Trout |
| Journal: | Genes, 2022, 13(8):1331 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #35893068
Add your comments
Note similar findings
Note contradictions
|
