Pig QTL Database

Release 56
(Apr 24, 2025)

Curator: Cari Park
Curated: 2013-12-11
Updated: 2024-04-23

Publication # 22688438 Details

Authors:	Rohrer G A, Nonneman D J, Miller R K, Zerby H, Moeller S J (Contact: gary.rohrer@ars.usda.gov)
Affiliation:	USDA, ARS, U.S. Meat Animal Research Center, Spur 18D, Clay Center, NE 68933-0166, USA
Title:	Association of single nucleotide polymorphism (SNP) markers in candidate genes and QTL regions with pork quality traits in commercial pigs
Journal:	Meat Science, 92 (4): 511-8 (2012)	DOI: 10.1016/j.meatsci.2012.05.020
Links:	PubMed \| Abstract \|	( Related study: none )
Click on each trait to browse further along the related trait ontology tree Click on each chromosome number to find the detailed QTL information on that chromosome Number of QTL/association reported by traits: QTL for Marbling reported for chromosome(s): Chr.1: Asso:23040, Asso:23049. Chr.2: Asso:23058, Asso:23060. Chr.5: Asso:23071. Chr.17: Asso:23081. QTL for Shear force reported for chromosome(s): Chr.1: Asso:23041. Chr.2: Asso:23062, Asso:23063, Asso:23064, Asso:23065, Asso:23066, Asso:23067, Asso:23068. Chr.5: Asso:23070. Chr.17: Asso:23083, Asso:23084. QTL for Drip loss reported for chromosome(s): Chr.1: Asso:23042. Chr.2: Asso:23061. QTL for Meat color reported for chromosome(s): Chr.1: Asso:23043, Asso:23044, Asso:23046, Asso:23047. Chr.2: Asso:23054, Asso:23056. Chr.15: Asso:23075, Asso:23076, Asso:23077. Chr.17: Asso:23079, Asso:23082. QTL for Muscle pH reported for chromosome(s): Chr.1: Asso:23045, Asso:23051. Chr.2: Asso:23053, Asso:23055, Asso:23057. Chr.15: Asso:23074. QTL for Intramuscular fat content reported for chromosome(s): Chr.1: Asso:23048. Chr.6: Asso:23072. Chr.17: Asso:23080. QTL for Cooking loss reported for chromosome(s): Chr.1: Asso:23050. Chr.5: Asso:23069. Chr.15: Asso:23073. QTL for Thawing loss reported for chromosome(s): Chr.1: Asso:23052. Chr.2: Asso:23059. Chr.15: Asso:23078. Chr.17: Asso:23085. QTL/association Reported by chromosomes: Chr.1 (13), Chr.2 (16), Chr.5 (3), Chr.6 (1), Chr.15 (6), Chr.17 (7). Number of gene-based eQTL/associations: None

Cite this Dataset:

Animal QTLdb: Dataset from Rohrer G A, Nonneman D J, Miller R K, Zerby H, Moeller S J (2012). Association of single nucleotide polymorphism (SNP) markers in candidate genes and QTL regions with pork quality traits in commercial pigs. Meat science, 92 (4): 511-8; Curated into QTLdb on 2013-12-12. Universal link to this data set: https://www.animalgenome.org/QTLdb/supp/?t=ChMf0Y7BtC

Rohrer G A, Nonneman D J, Miller R K, Zerby H, Moeller S J (2012). Association of single nucleotide polymorphism (SNP) markers in candidate genes and QTL regions with pork quality traits in commercial pigs. Meat science, 92 (4): 511-8; DOI: https://dx.doi.org/10.1016/j.meatsci.2012.05.020

Publication # 22688438 Details

Number of QTL/association reported by traits:

QTL/association Reported by chromosomes:

Number of gene-based eQTL/associations: