| QTL Map Information |
|---|
| Chromosome: | 4 |
| QTL Peak Location: | 17.20 (cM) |
| QTL Span: | 17.20-17.20 (cM)
18.7-18.7 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs330213408 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | 0.072 |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #153595
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were from three different experimental backcrosses: F1 (Iberian x Landrace) x Landrace, F1 (Iberian x Duroc x Duroc, and F1 (Iberian x Pietrain) x Pietrain. |
| Breeds associated:
|
| Design: | Animals were genotyped using either the Illumina PorcineSNP60 BeadChip or the Affymetrix Axiom Porcine Genotyping Array and analyzed for growth, fatness, and production traits. |
| Analysis: | GWAS were carried out for each backcross individually and for the merged dataset. |
| Software: | Phase, Qxpak, GenABEL in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Martínez-Montes ÁM, Fernández A, Muñoz M, Noguera JL, Folch JM, Fernández AI |
| Affiliation: | Departamento de Genética Animal, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Madrid, Spain |
| Title: | Using genome wide association studies to identify common QTL regions in three different genetic backgrounds based on Iberian pig breed |
| Journal: | PloS one, 2018, 13(3): e0190184 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #29522525
Add your comments
Note similar findings
Note contradictions
|
