| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | 0.00 (cM) |
| QTL Span: | 0.00-0.00 (cM)
63.5-63.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Suggestive |
 |
FDR | 0.0534 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | FAM132A (family with sequence similarity 132, member A) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Iberian and Landrace pigs and their backcrosses with Duroc and Pietrain. |
| Breeds associated:
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| Design: | Animals were genotyped for 10 indels in genes related to lipid metabolism and analyzed for fatty acid composition traits. |
| Analysis: | Mixed linear models were used. |
| Software: | GEMMA, SAMtools, Dindel |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Crespo-Piazuelo D, Criado-Mesas L, Revilla M, Castelló A, Fernández AI, Folch JM, Ballester M |
| Affiliation: | Plant and Animal Genomics, Centre for Research in Agricultural Genomics (CRAG), CSIC-IRTA-UAB-UB Consortium, Bellaterra, Spain |
| Title: | Indel detection from Whole Genome Sequencing data and association with lipid metabolism in pigs |
| Journal: | PloS one, 2019, 14(6): e0218862 |
| Links: |
PubMed | Abstract | List all data
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