| QTL Map Information |
|---|
| Chromosome: | 7 |
| QTL Peak Location: | 0.00 (cM) |
| QTL Span: | 0.00-0.00 (cM)
98.1-98.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs336641062 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 5.99% | | P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Large White x Minzhu crossbred pigs. Songliao Black pigs were used in a confirmation study. |
| Breeds associated:
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| Design: | Following genotyping of a set of variants on SSC7 and SSC14, animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for vertebra number. |
| Analysis: | Mixed linear models were used for GWAS. |
| Software: | DMU, SAS v.8.2, TASSEL |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Liu Q, Yue J, Niu N, Liu X, Yan H, Zhao F, Hou X, Gao H, Shi L, Wang L, Wang L, Zhang L |
| Affiliation: | Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing 100193, China |
| Title: | Genome-Wide Association Analysis Identified BMPR1A as a Novel Candidate Gene Affecting the Number of Thoracic Vertebrae in a Large White x Minzhu Intercross Pig Population |
| Journal: | Animals : an open access journal from MDPI, 2020, 10(11) |
| Links: |
PubMed | Abstract | List all data
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