| QTL Map Information |
|---|
| Chromosome: | 4 |
| QTL Peak Location: | 84.20 (cM) |
| QTL Span: | 84.20-84.20 (cM)
84.0-84.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs80894127 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 1.40E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were from a White Duroc x Erhualian cross and a Chinese Sutai half-sib population. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for fatty acid composition traits. A final set of 39454 (Duroc x Erhualian) or 45308 SNPs (Sutai) were used for analysis. |
| Analysis: | A mixed model was used. |
| Software: | GenABEL in R, PLINK |
| Notes: | Several genome-wide significant SNPs were not entered, because they were not mapped to SS_10.2 a |
| Links: | Edit |
| Reference |
|---|
| Authors: | Yang B, Zhang W, Zhang Z, Fan Y, Xie X, Ai H, Ma J, Xiao S, Huang L, Ren J |
| Affiliation: | Key Laboratory for Animal Biotechnology of Jiangxi Province and the Ministry of Agriculture of China, Jiangxi Agricultural University, Nanchang, China. |
| Title: | Genome-wide association analyses for fatty acid composition in porcine muscle and abdominal fat tissues. |
| Journal: | PloS one, 2013, 8 (6): e65554 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | In abdominal fat |
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