| QTL Map Information |
|---|
| Chromosome: | 13 |
| QTL Peak Location: | 83.12 (cM) |
| QTL Span: | 83.12-83.12 (cM)
140.0-140.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were White Duroc x Erhualian intercross pigs. |
| Breeds associated:
|
| Design: | Animals were first genotyped for 194 microsatellite markers to identify genomic regions associated with susceptibility to ETEC F4ac. A region on SSC13 was further refined using 50 additional markers, followed by genome-wide association analysis using 39,720 SNPs on the PorcineSNP60 BeadChip. |
| Analysis: | Multipoint linkage analysis, recombination breakpoint analysis, genome-wide association analysis, and combined linkage disequilibrium linkage analysis were performed. |
| Software: | Allegro, SimWalk2, BEAGLE, GenABEL |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Ren J, Yan X, Ai H, Zhang Z, Huang X, Ouyang J, Yang M, Yang H, Han P, Zeng W, Chen Y, Guo Y, Xiao S, Ding N, Huang L |
| Affiliation: | Key Laboratory for Animal Biotechnology of Jiangxi Province and the Ministry of Agriculture of China, Jiangxi Agricultural University, Nanchang, People's Republic of China |
| Title: | Susceptibility towards enterotoxigenic Escherichia coli F4ac diarrhea is governed by the MUC13 gene in pigs |
| Journal: | PloS one, 2012, 7(9): e44573 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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