Custom Name | dbSNP id | Position | Length | Taxonomy | Molecule | Class | Build | Flanking Sequence - Left | Alleles | Flanking Sequence - Right | MAF | MAF Species | Chromosome | Annotation | Reference | Source | Scores (seq.qual/info) |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
WU_BX1_372 | CTGTCACCTCCCTGGCTCTCTGCCCAGAGG GCAGCCTCCAGAGGGAACGCCTCTTTTCTA | C/T | TTCTTTGCGCCCCACTTCCCACCCTCCAAC CCCGAGGGCACAGAGATGCGGACTCTCCAG | 0.36 | LargeWhite, Landrace, Pietrain | SSC6q22 | CU457447.1 | "Rohrer et al., 2007" | Martien Groenen | 120 / 70 | |||||||
WU_BX1_233 | CTCACCAGAGAGGAGGTCGAGCACATCAGT ACTTTGATTCTGAGAGCCTTTCTGCTTACC | A/G | TTCCAGAAAACGCCAAAGACCGCATCATTT TAGGAAAGAGTATAATTGTCCCTTTAAAAG | 0.37 | LargeWhite, Landrace, Pietrain | SSC17q14 | CU467034.1 | "Rohrer et al., 2007" | Martien Groenen | 120 / 70 | |||||||
WU_BX1_293 | CTTCATTTCAAGGACTTTCCAGTCCCCACG GTTGGGGGATTGTAAGGTTCCTTAGTGCTA | A/G | GTGGTCTGTCATCTGTCTCCTGGGTCATCT TAGGTCACCCAGCCTACGGGAAAGCTGTCC | 0.38 | LargeWhite, Landrace, Pietrain | SSC3 | "Rohrer et al., 2007" | Martien Groenen | 120 / 50 | ||||||||
WU_BX1_55 | ATATGTTCCGTGACCCATAGTTTCCCTGGA AAATGGGTCTCCCAGGACCGTGAGCGATGG | C/G | CCTGGATAAGTGCAGTCATTACCCCAGCGC CCGACCCCAGGACAGGCTCTCTTTAGCTCG | 0.39 | LargeWhite, Landrace, Pietrain | SSC12p15 | CU464073.2 | "Rohrer et al., 2007" | Martien Groenen | 120 / 70 | |||||||
WU_BX1_173 | TGGGTCTATACTTAGAATTCAGATGAGCCT TGGGGAGGGGAAGGGGGCAGTGTTAATCCC | C/T | GGTTGTTTTGAAGTTGTCCATGTAAGCAGG TTAGCATCTAAACGGTCCCAAACCGAAGCA | 0.39 | LargeWhite, Landrace, Pietrain | SSC5q25.2 | AY327443 | "Wyszynska-Koko et al., 2004" | Martien Groenen | 120 / 70 | |||||||
WU_BX1_98 | GAGGTCAGTCTAGAGGCAGTGGTAAGGACC AGCTGACGTTCAAGGGCCCTTCCAGCTGTG | C/T | GTTTAGGATTTGAAAACCCAGAGGGTCTCG AGGTACAGTGGGTACCTTTGGAGCCAAGTT | 0.4 | LargeWhite, Landrace, Pietrain | SSC5 | "Rohrer et al., 2007" | Martien Groenen | 120 / 50 | ||||||||
WU_BX1_355 | TAAGGTTTTTTTATGCCTTAGAATTAACTT GAATTTACCCAGGCTTTAGGATGGGGGAAA | A/C | CCCCCAGAGAAAGTGTGTGTAAATATTTAA AGAGTGTCTGTTGACAGTTCCCATCCACAT | 0.4 | LargeWhite, Landrace, Pietrain | SSC5 | AC145073.2 | "Rohrer et al., 2007" | Martien Groenen | 120 / 70 | |||||||
WU_BX1_29 | ATCTTAACCCCAAACTCTCAGTCCATCCCA CTCCCTTTGTCTATTTCATAACTCAGGGAT | A/G | TAAACTTTTCAATTAAGAAGCAATTGTGAG TTCCTGCTGTGGCTCGGTGGGTTAAGAACC | 0.42 | LargeWhite, Landrace, Pietrain | SSC13 | AY044238 | "Grindflek et al., 2004" | Martien Groenen | 120 / 70 | |||||||
WU_BX1_21 | GTGTGCTTCATGTCTCACTTTAATTTGTAT CTCATCCTGATCATGTGTAATTCCATCATC | A/G | ATCCCCTGATTTATGCACTCCGGAGCCAAG AACTGAGGAAAACCTTCAAAGAGATCATCT | 0.42 | LargeWhite, Landrace, Pietrain | SSC1q17.1 | CU618334.2 | "Kim et al., 2000" | Martien Groenen | 120 / 70 | |||||||
WU_BX1_109 | GCCTCTAGATGGACAAGGCAGGAGGATGTA GAGGAAGGGGGGCCTCCGGGCCCGAGGGAA | A/G | GTGAGTTCAAGGCCAGTTCTGGGGAGCTGG GACTGGGGGCAGTGGGCAGTCCTCAAACCT | 0.43 | LargeWhite, Landrace, Pietrain | SSC15 | AF214521 | "Ciobanu et al., 2001" | Martien Groenen | 120 / 70 | |||||||
WU_BX1_378 | CAGGACGGCCCCCTCTGTGTCCACGTTGAA TTGCATTTGTGATGCTGTTTATGTGTCCCC | A/G | ATGGTGGCTGTCCACCTGTCTAGGTCAGAG ATTTGCTGGGATGGGGGAGGTTTGGAGCTT | 0.43 | LargeWhite, Landrace, Pietrain | SSC8 | "Rohrer et al., 2007" | Martien Groenen | 120 / 50 | ||||||||
WU_BX1_244 | CTCCTGGGGCCTCCCACCCCTCCATTCCAG CCAGGTGGGGCCTCACCCGTGCATGGGTCC | C/T | GACTGGCTGCCACTGTGCATGTCTAGGTGG CCGAAGAGAGGGCTGATCCGGGGGTCCTGG | 0.47 | LargeWhite, Landrace, Pietrain | SSC3p16 | CU464163.1 | "Rohrer et al., 2007" | Martien Groenen | 120 / 70 | |||||||
WU_BX1_367 | GTTTTCGGGCGCTGCCCGGAGAGACCTGCC TGCTCGCCTCCGACGTCTCGGTCAGGTAGC | A/T | CTGGTCTGAGTCTGTGGAAGAACACATCTG CCTCTGCCAGTCAGAGGCGGCATCTTTAGA | 0.47 | LargeWhite, Landrace, Pietrain | SSC8 | "Rohrer et al., 2007" | Martien Groenen | 120 / 50 | ||||||||
WU_BX1_331 | CTTGTACTATATTTAGCCAATGTAAGTAAG TATAAGCTATTTAGAAATTCTTAAATGCCA | A/G | CTAAGATTGTGAGTATTAAAATCTTTCAGT GTGGTTTATTGTTTTTATCCTTGAAATAGA | 0.49 | LargeWhite, Landrace, Pietrain | SSC13q46 | CU606918.2 | "Rohrer et al., 2007" | Martien Groenen | 120 / 70 | |||||||
WU_BX1_70 | TCTCTAGGTGGAGGCGCCTAGCTCTTCTCT GAGGCAGGGAGGAGAGCTGGGAGTGTCAGG | A/G | GCCGATTTTGATATCCCAGGCTGGGGTGGG GACAGTGGAGAGACAGAGCTTTCAGAAAGG | 0.52 | LargeWhite, Landrace, Pietrain | SSC6q24 | CU638861.1 | "Rohrer et al., 2007" | Martien Groenen | 120 / 70 | |||||||
SH023 | Genomic | TGCCCCTGAACTTCCAAGCACTTTCTTCTG TTGGAGGGAACCTGGTGTCTCAGAACTCCT | C/T | GCTGTGCTTCAAGCTCCCCCTCAGAATGCC CTCCTCTGAGAACCAGGTTTAGGGTTCCAG | 0.013 | Pietrain, Duroc, Landrace, Large White | |1420681632|"ADAMTS2, Intron 10" | By sequencing | Max Rothschild (Du1) | 120 / 50 | |||||||
SH025 | Genomic | TTTAACTCTAATGGTCTGCTTTTGCACAAA GAAAAGTATATTGTTGCAGTCCAATCATTA | C/G | TGATCTTTGTAAATCAAAGTCATACGAATA GCCGCTTTACTTAATCAATATAGGCTTTAC | 0.469 | Pietrain, Duroc, Landrace, Large White | |1008638059|"APIP, Intron 2" | By sequencing | Max Rothschild (Du1) | 120 / 50 | |||||||
SH027 | Genomic | GTAAAATGCTGAGAGTTGCTTCTGCCTCCT ACATTTTCATATATATTTCTTTCTTTTGAA | A/G | GTGTGAAATCCATGGTAACCAGGCTTTTAT CTAATTAGGGGAAATAAAAATCTGAAAACA | 0.329 | Pietrain, Duroc, Landrace, Large White | |1008638059|"APIP, Intron 2" | By sequencing | Max Rothschild (Du1) | 120 / 50 | |||||||
SH029 | Genomic | TGGGTGTGAATCACAGCACCTGCTCCTGGA GGAAGAAGACAGTCACTGCTCAGTGAATAC | A/T | AAATTACACCTTGTAAAGCAGGGGGCGGGG GGAAATATACATATCTCCATAAACACACAC | 0.01 | Pietrain, Duroc, Landrace, Large White | |1420479919|"APIP, Intron 4" | By sequencing | Max Rothschild (Du1) | 120 / 50 | |||||||
SH039 | Genomic | GATGAGGAGGTGAAGGTGGCCCTTCTGGGC CTCGGGAGACTGTTTCCGGGCCCTTTTCGA | A/C | GTTCTGGCTGTCATGGCCTTCCTGTTACAG AGGATGCGCCTGCTCTTGGGCCCACATGGA | 0.003 | Pietrain, Duroc, Landrace, Large White | |gnl|ti|1382197956|"ARHGDIA, Exon 2" | By sequencing | Max Rothschild (Du1) | 120 / 50 | |||||||
SH044 | Genomic | CAGAAATGGAGCAGAAGGTGGCACTTCTGC CCATCACCAGCTTTCCAGAGGTCTCCTCCC | A/G | CCAGTCAGACATTTTTGAGAAATTATTCAT CTCATAAAAATTCAAGGCCCCATTAGAACA | 0.013 | Pietrain, Duroc, Landrace, Large White | |CK456157|"B4GALT7, Intron 3" | By sequencing | Max Rothschild (Du1) | 120 / 50 | |||||||
SH089 | Genomic | GCGGATGAGTCCAGGATAAACACAGGTCAG AAACCGAGGCCCTTCTCTGTCTGGGTCCCC | A/G | AGTCGTGGAGCCTCTTTATGCTCTGGGAGT TGTTCTGTCTGGCCCGCAGGCTTACTCAGC | 0.151 | Pietrain, Duroc, Landrace, Large White | |gnl|ti|742986505|"CARD14, INTRON 4" | By sequencing | Max Rothschild (Du1) | 120 / 50 | |||||||
SH104 | Genomic | GAGTGCTACTCTGTCAGCTAAAGGGTGGCA CCTGCTGGCAGGAGAAGAGAATGCAGCTAT | G/T | TGAGAGAACCCTGCAAAGGGAAAATGTCAT TTTTTTTACTTGAGCCTAACAGACTTAAAA | 0.123 | Pietrain, Duroc, Landrace, Large White | |1658673098|"CAT, Intron 11" | By sequencing | Max Rothschild (Du1) | 120 / 50 | |||||||
WU_BX1_377 | ACAGATCGGCTCACGGTCCTCAAGGCCAAG CCACAGTCCATACAGAGGGGYGTCCTCACC | A/G | TCTGCAGTGACCCCTACACGCTGGCCCAGC AGCTGACTCACATAGAGCTGGTGAGGCCAT | 0.43 | LargeWhite, Landrace, Pietrain | SSC8 | "Rohrer et al., 2007" | Martien Groenen | 119 / 50 | ||||||||
WU_BX1_171 | TACTCAAGGGTCACRGGTGGAAGGCAAAAA GAGAGCCAAGGAACACAGTGTGAGGTCTCC | A/G | AGTTGAAGAAGGGGCCAGAGCCCCACAAGG CGAGAGCAGGGCGTCCCTTCTGGTGGCTCA | 0.45 | LargeWhite, Landrace, Pietrain | SSC3 | "Rohrer et al., 2007" | Martien Groenen | 119 / 50 | ||||||||
WU_BX1_340 | CCTTGTAAATAACCACTGTTCAAGTCGTGG CAGGAGGAGGATAAAGCAAAAGGCCCCCTC | C/T | GCCAGAACCCTGGAGCCAGGGAGGTGGCCA CAGCCAGCTCAGCTYTGGACCTGACCCAGG | 0.47 | LargeWhite, Landrace, Pietrain | SSC12 | "Rohrer et al., 2007" | Martien Groenen | 119 / 50 | ||||||||
WU_BX1_301 | CTCCCCGTCAACACAGACATTCTATATTCC GCAAACTCTGCGCTCTCGTAACGCAGCGCT | C/T | CAGGAGTCAGGATTCCATGACCCGTAGCCT CGCACACCGTCTCGGARGCAGCTTTGCACG | 0.48 | LargeWhite, Landrace, Pietrain | SSC2q29 | CU681821.1 | "Rohrer et al., 2007" | Martien Groenen | 119 / 70 | |||||||
SH007 | Genomic | TCCCCAGAACTACATCACTGCTGAGGAGCT GCGGCGGGAACTCCCGGCRGAGCAGGCCGA | A/G | TACTGCATCCGCCGCATGGCGCCCTACAAA GGGGCCGGGGCTCCGGCTGGAGCCCTGGAC | 0.003 | Pietrain, Duroc, Landrace, Large White | |AJ301019|"ACTN3, Exon 21" | By sequencing | Max Rothschild (Du1) | 119 / 50 | |||||||
SH080 | Genomic | TCACATTTCCAGCAACAAGGGTATTTCATG ASAGGTGCATTAAAAAAAGAGAGATGAAAA | C/T | GTAATTAGTTTGTTGAGCTCTACATTTTGA GCACTTGGGTGTATTTAGGTACTAACTTTT | 0.466 | Pietrain, Duroc, Landrace, Large White | |DN122490|"CANX, Intron 9" | By sequencing | Max Rothschild (Du1) | 119 / 50 | |||||||
SH086 | Genomic | ACCTGGGGGMGGCAGCGGGTGGCCTGGGGG CCGGGCTGGGGGCACTCGGAGGCCAGAAGG | A/T | GCCGGGTCCCTCGTCCTTGCTGGCAGCTGG TTCCAGACTCGGGGTCGCTCTCCTCAGTCC | 0.348 | Pietrain, Duroc, Landrace, Large White | |gnl|ti|742986505|"CARD14, INTRON 4" | By sequencing | Max Rothschild (Du1) | 119 / 50 | |||||||
SH088 | Genomic | CTCCTTTCAGTTCTGGGGGNGGGGTGTGCA CCCCACCTACTGGGTGTTACTAAAACACAC | A/G | GCTTTAGGTGAAATGTAAACAGTGCTGAGT GTGCATCTCGGAATGAGCCGTGTGTGGTTC | 0.23 | Pietrain, Duroc, Landrace, Large White | |gnl|ti|742986505|"CARD14, INTRON 4" | By sequencing | Max Rothschild (Du1) | 119 / 50 | |||||||
WU_BX1_6 | CCTTTTTGGTACCCACGTTCGTTTGGTATC CATGTGTTCCCCTTCTCACAGCCCAGGGGC | C/T | GCCTCCTTTCCCCTGTCTTCCACGTGCCAG CTGCCACCAYAAGGTCAARGGGGTCCTTGC | 0.4 | LargeWhite, Landrace, Pietrain | SSC7q11.23 | CR956379.5 | "Rohrer et al., 2007" | Martien Groenen | 118 / 70 | |||||||
WU_BX1_284 | AGTTGTATGTCCATTTCAGTGCTCTAGGGT AGAAGCGTGACTTCACTTCCTCAGTAAGGC | A/T | CATCTTCTTCACACTTTCTCACGCTCCGGT CCTATGCCTACAACKGATGTAGGTACACGY | 0.51 | LargeWhite, Landrace, Pietrain | SSC18 | "Rohrer et al., 2007" | Martien Groenen | 118 / 50 | ||||||||
SH015 | Genomic | GCTATCCAGTAGGACCTCACTTGCTTACCC ATGCTAAATATAATAGTTTGCATTTACCAA | C/A | CCCAAACTCCCAGTCCGTCCYACTCCCTCC TTGCCCCACCTTGGCMACCGCAAGTCTGTT | 0.496 | Pietrain, Duroc, Landrace, Large White | |1420242113|"ADAMTS19, Intron 9" | By sequencing | Max Rothschild (Du1) | 118 / 50 | |||||||
SH033 | Genomic | GGTACRTTCTCAATCAATACCTTTTAGCTG GTGTGCGAACAGCTATAATAATATGAAGAT | C/T | GTAATCATCATACGACTACCTCTTACTTAG GGATTCCTATGTGCCAGGCGCTGGGCAAAT | 0.443 | Pietrain, Duroc, Landrace, Large White | |1420479919|"APIP, Intron 4" | By sequencing | Max Rothschild (Du1) | 118 / 50 | |||||||
SH034 | Genomic | CTATGTGCCAGGCGCTGGGCAAATCCCCTT TACGGATGTTACCTCTTAGCATCATCACAA | C/T | GACCATTCCCCCCATTTAACGGTCAGGGAC ATGGAGACCCAGGGATGTTAAGTAACTTGT | 0.428 | Pietrain, Duroc, Landrace, Large White | |1420479919|"APIP, Intron 4" | By sequencing | Max Rothschild (Du1) | 118 / 50 | |||||||
SH067 | Genomic | CACAGTTCTCTCCAATTCCAAGAACAACCA GGGGCCAAATGTAGCACTTCATATCTCTCC | C/T | GGTTTTAAAATAAATGCTACNAACCACACT GATTAAAATGCCTTCTGAGGGTCTCCTAGA | 0.325 | Pietrain, Duroc, Landrace, Large White | |CK465720|"COL9A1, INTRON 29" | By sequencing | Max Rothschild (Du1) | 118 / 50 | |||||||
SH071 | Genomic | ATCCTCAAGTGGACATTGNCCTTGAGCCCT GTGGGTTGGGAGTCAGGAGAGCCACATTCT | C/T | AGGGAANGCCAGAGGGACCAGGAAGCCTGG CTGCTGATCCTGGGAAGGAGGCAGGCAGTG | 0.375 | Pietrain, Duroc, Landrace, Large White | |BF443390|"CALCA, Intron 2" | By sequencing | Max Rothschild (Du1) | 118 / 50 | |||||||
SH081 | Genomic | AAGAGGATGCTTCCCGGGGCCGGGCCTGCT GTTGGACGTCGGGGTCCCCGGGCTGACCTG | C/T | CCCTACACCAGGTGGAGAAGGACATTCTGG AGCAGAGCCTGGANGAGGCNCTGGAGAGCA | 0.151 | Pietrain, Duroc, Landrace, Large White | |gnl|ti|1417276799|"CARD14, INTRON 2" | By sequencing | Max Rothschild (Du1) | 118 / 50 | |||||||
SH116 | Genomic | GAGATGCTCCACCTGCCCTGGGAGGGGCTT GAGATTCGCGAGNGGTTNGACCAGCAGACA | C/T | ACCGCCAGCCACAGTGATCTTACAACCACA CAGTCTCTCTTTAAAAAAATGCCGCCCATC | 0.373 | Pietrain, Duroc, Landrace, Large White | |gnl|ti|1420472119|"COG1, INTRON 1" | By sequencing | Max Rothschild (Du1) | 118 / 50 | |||||||
SH124 | Genomic | CGGGTGTTCCCCGCCTCTCTGGAGAAGGGT CTCGGGCAGGGGATGAAAGAAGGGAANAGG | C/G | GTCCTGGAAGACCTTACGAAGCCCTCAGCC TCCCCCTCCTTGCTCCTTCCCGATCTAGAG | 0.003 | Pietrain, Duroc, Landrace, Large White | |AK236626|"COL1A1,INTRON 47" | By sequencing | Max Rothschild (Du1) | 118 / 50 | |||||||
SH037 | Genomic | TATAGKCTTTACAGAAAGAATACCAAGTGA CTTTAATGTCTTTATAATGCTGGTGACACA | C/G | TAAAATGCTGAGAGTTGCTTCTGCCTCCTA CATTTTCATATATATTTCTTTCTTTTGAAR | 0.102 | Pietrain, Duroc, Landrace, Large White | |1008638059|"APIP, Intron 2" | By sequencing | Max Rothschild (Du1) | 117 / 50 | |||||||
SH112 | Genomic | CAAATGCATTTGCATGAAGTTGTGCAAAGT AGTCTCTTAAATGTTTAATATTTTCTTCTG | C/T | TTCAATGCTTACATCTCCCTTTTTTTTTTT TTTTTTTTATTGTTGTGTCTTTTTCTTTTT | 0.48 | Pietrain, Duroc, Landrace, Large White | |1008591767|"CFL1, Exon 5" | By sequencing | Max Rothschild (Du1) | 117 / 50 | |||||||
WU_BX1_72 | ACACCAGAGCTGTGCGCCCGGCCGGAACAA AGGGCTAGGAAAGAAAACCACAGCCTSRGT | A/G | GGGAGGGCCCAGGTCCTTCRTGCTGTGCAY TCAGGCGTCTCTTCTTGCCCTTGTAGCATA | 0.51 | LargeWhite, Landrace, Pietrain | SSC17 | "Rohrer et al., 2007" | Martien Groenen | 116 / 50 | ||||||||
SH035 | Genomic | AGTCCAATCATTASTGATCTTTGTAAATCA AAGTCATACGAATAGCCGCTTTACTTAATC | A/G | ATATAGKCTTTACAGAAAGAATACCAAGTG ACTTTAATGTCTTTATAATGCTGGTGACAC | 0.423 | Pietrain, Duroc, Landrace, Large White | |1008638059|"APIP, Intron 2" | By sequencing | Max Rothschild (Du1) | 116 / 50 | |||||||
SH058 | Genomic | CCGGTGGGGAGCAACGGAGCTGACACATGT GGATCTGTGTTGATCTGGGATGCCTGAGCC | A/G | AGGCAGGGTATCCCAGGCAGCAGTGTGAAC CCCACCCTAATTTTCAGGAGTGTGGGTCAC | 0.446 | Pietrain, Duroc, Landrace, Large White | |AF201724|"COL2A, INTRON 28" | By sequencing | Max Rothschild (Du1) | 116 / 50 | |||||||
SH062 | Genomic | CACCAGTGGGAGGACAGCNAGGCACGCACT NCTTNCTTGGGCAGTGTGGGAAGTCCCCAG | A/G | CCCTTCTAGTCCTAGATGAGGCTCCCGGGT TCTCTGGGGTGCTGGCTCAGCTCACCTTTG | 0.438 | Pietrain, Duroc, Landrace, Large White | |AF201724|"COL2A, INTRON 28" | By sequencing | Max Rothschild (Du1) | 116 / 50 | |||||||
SH090 | Genomic | ATTCTTTGAATGACTGGAGTTTAGTATTTC TGCTTTTCAGCTACATCGAAGTCCCCTCCC | A/G | CCCCTGAGTTCACTTAATGGCGATTTGTTA CATTGCACATTTATGTTTCTGCAGNTNAAT | 0.22 | Pietrain, Duroc, Landrace, Large White | |gnl|ti|1651818101|"CARD14, 3'UTR" | By sequencing | Max Rothschild (Du1) | 116 / 50 | |||||||
SH095 | Genomic | GNTNAATGAATATTTTACAGTTAAAAAGTT TNGAAANGCCCCCAATGATTAAAATGATGA | A/G | TTCTATTATGCCATTTTAACACACACACAC ACACACACACACAGTGATAAGAAGATCATT | 0.222 | Pietrain, Duroc, Landrace, Large White | |gnl|ti|1651818101|"CARD14, 3'UTR" | By sequencing | Max Rothschild (Du1) | 116 / 50 | |||||||
WU_BX1_352 | GACCTTTTCCCAAATGACGACGACGACCCT GGCCAAGGAAGTAAGTTGGTTGGGG | C/T | GGTCCCCGGCGGCACACGAGTGGGAGGTGT TAGTCCTCTTGGGGGGGTGACTGCTGTGAT | 0.4 | LargeWhite, Landrace, Pietrain | SSC7q26.3 | CU694215.2 | "Rohrer et al., 2007" | Martien Groenen | 115 / 70 | |||||||
SH061 | Genomic | CCACCCTAATTTTCAGGAGTGTGGGTCACC AGTGGGAGGACAGCNAGGCACGCACTYCTT | A/G | CTTGGGCAGTGTGGGAAGTCCCCAGNCCCT TCTAGTCCTAGATGAGGCTCCCGGGTTCTC | 0.059 | Pietrain, Duroc, Landrace, Large White | |AF201724|"COL2A, INTRON 28" | By sequencing | Max Rothschild (Du1) | 115 / 50 | |||||||
SH092 | Genomic | CCCNCCCCTGAGTTCACTTAATGGCGATTT GTTACATTGCACATTTATGTTTCTGCAGNT | C/T | AATGAATATTTTACAGTTAAAAAGTTTNGA AANGCCCCCAATGATTAAAATGATGANTTC | 0.25 | Pietrain, Duroc, Landrace, Large White | |gnl|ti|1651818101|"CARD14, 3'UTR" | By sequencing | Max Rothschild (Du1) | 115 / 50 | |||||||
SH120 | Genomic | TTTTGGTCTCCAGGGTCCCCCTGGCCCTCC CGTAAGTATGCTCAGCCCTCCCCAGCCCCC | A/G | GCTGCCACTGCATCTTCTTTCCTCATCCCT CCAAGCCCTGCTGTGTGATGGGGGGAGGCC | 0.444 | Pietrain, Duroc, Landrace, Large White | |AK236626|"COL1A1,INTRON 45" | By sequencing | Max Rothschild (Du1) | 115 / 50 | |||||||
SH010 | Genomic | AAGGAGACAGTTTTACACAGTATTCCGAAG AAACTTCTAACCATCTAGAAGAAGGCTATT | A/G | CCGTCAGAYTGACTGACTGCCTAGAGATGT TCCATGCGAGGTAAACGGTGTAGACTCTTG | 0.117 | Pietrain, Duroc, Landrace, Large White | |1420114871|"ADAMTS19, Intron 3" | By sequencing | Max Rothschild (Du1) | 110 / 50 | |||||||
SH018 | Genomic | ACTTAGAATGATAATCCCTAGTTGCGTCAT TATAATCATTTTCAACCTTACAAATCATCC | C/T | GCYCATCCTCTTGTTGAAARCGTGGAAACC AAGCAGCAAGCAGGTTATGTCCCAATTCAC | 0.278 | Pietrain, Duroc, Landrace, Large White | |1420242113|"ADAMTS19, Intron 9" | By sequencing | Max Rothschild (Du1) | 107 / 50 | |||||||
SH024 | Genomic | CCCCCGGCCTGGTACCCTAGCAGCCACGGC CTCCTTTTTTTTCCTTCTAGGAAACATCTC | C/T | GACCCCTCCAAGAAGAGCTACCTGTTTCAG TGGCTGTCCCGACCGGACCCCGACTCGCCA | 0.468 | Pietrain, Duroc, Landrace, Large White | |1417320503|"ADAMTS2, Exon 21" | By sequencing | Max Rothschild (Du1) | 102 / 50 | |||||||
SH057 | Genomic | TGCAGGTCCTCCTGGACCCGCCGTAAGTAC CTGCCCAGTCTGTCCAGGTGGCCAACGGGC | C/T | GGGGCTCGGTGGGCACCGGTGGGGAGCAAC GGAGCTGACACATGTGGATCTGTGTTGATC | 0.444 | Pietrain, Duroc, Landrace, Large White | |AF201724|"COL2A, INTRON 28" | By sequencing | Max Rothschild (Du1) | 101 / 50 | |||||||
WU_BX1_110 | ACATTCCTAGCACAAGAATTCAAAACTACA CATGAAGGATACCCAACCCA | A/G | CAACCATAAGCTTCTCTGACTATGTCCAAG ATGAGAGGGTTCTGAGTCTG | 0.36 | LargeWhite, Landrace, Pietrain | SSC7q21 | CT823558.24 | WU_in_silico | Martien Groenen | 100 / 70 | |||||||
WU_BX1_134 | GGCTTTGCACCATCTCCTCATCTCCCCTTA TCTGATACTCCATCTTCTAC | G/T | GCACCCGTACCTCCCACCCTTTCTTCAATA CTCCGGTAGTTCCTAGTAAT | 0.36 | LargeWhite, Landrace, Pietrain | SSC11q14.3 | CT956046.14 | WU_in_silico | Martien Groenen | 100 / 70 | |||||||
WU_BX1_101 | ACACACTTGTATGCAGAGTTAACCACTTGG AGTGGAAGCCATTTTGCAAG | C/G | ATGCCAGTTCAGCTACAGCCATCCATTGTG TCGGGCAGGAATAACTTTGG | 0.37 | LargeWhite, Landrace, Pietrain | SSC7q21 | CU633189.24 | WU_in_silico | Martien Groenen | 100 / 70 | |||||||
WU_BX1_163 | TTCTGTTTAAACTCAACTGGCCAGAATTCA ATCACATGGGCCTTATCCAA | C/T | TGAAAGAGAGGCAAGGAAGAAAGACAAATA TTTTATTTTTAACAAGCTCA | 0.38 | LargeWhite, Landrace, Pietrain | SSC6q32.1 | CU457701.1 | WU_in_silico | Martien Groenen | 100 / 70 | |||||||
WU_BX1_342 | CCTAGGGTCAGTCCAAAGTTCTGCAGGAGA AACATCAACCAGGGTCGCCG | C/T | GTTTGAACATGAGTCATTTCAGGAAGCTAA AAAAAGAAGAAAAAACCAGA | 0.4 | LargeWhite, Landrace, Pietrain | SSC10q13 | CU466345.1 | WU_in_silico | Martien Groenen | 100 / 70 | |||||||
WU_BX1_114 | AAAGGGAAGATTGAAGATGGGAAAAGGAGG TGAAGTGGAGGTGATGAGAT | A/G | GTCTCAGATGAGTCAGTTTGGGAAAATTTA GGCATCTCAAAGAAGCAATG | 0.41 | LargeWhite, Landrace, Pietrain | SSC1p11.2 | CU138526.3 | WU_in_silico | Martien Groenen | 100 / 70 | |||||||
WU_BX1_74 | TGCTGTTAAGGATGATTTTCTTGAAAGGAA AAGAGAGAACTGCATCATGG | C/T | CCCATTCTTCTGTGTCCATATGACGAACGG CTGAGCACTTAGAAGCAGCA | 0.42 | LargeWhite, Landrace, Pietrain | SSC10q16.1 | CU467046.24 | WU_in_silico | Martien Groenen | 100 / 70 | |||||||
WU_BX1_78 | ACTGAGAGGTTTCCTAATTTATGTAGAGAA AATATTTCTTATCCAAAGAA | C/G | AAAATAAGAGAATTCTTCATGAGAGATGAG GAGGGGGTAATAGTGAGGGA | 0.42 | LargeWhite, Landrace, Pietrain | SSC6q32.1 | CU442743.3 | WU_in_silico | Martien Groenen | 100 / 70 | |||||||
WU_BX1_88 | GTGCCTAAGGAGATGTGAACTTCTAAGTAG GTTGTGCATCTCACATTGGA | C/T | ATTTCTTCCATTTAAAATTTCTTTTAACTT ACATGTTAAGATCTAATATT | 0.42 | LargeWhite, Landrace, Pietrain | SSC6q32.1 | CU442743.3 | WU_in_silico | Martien Groenen | 100 / 70 | |||||||
WU_BX1_302 | TCACATTTTAGTGGATGTCACAGTAATTGT GTAATGAGACATTCTTTCCC | G/T | CCCGCGATGGACAGCAGCATTGAAATAACA CGTTAAGCCTAGCCTCATGT | 0.42 | LargeWhite, Landrace, Pietrain | SSC10q16.1 | CU467046.24 | WU_in_silico | Martien Groenen | 100 / 70 | |||||||
WU_BX1_149 | TCCATCCAAGAAGCCACCTCCAGCAGTTAG CATCCTCTATTTAATTTCTA | A/G | GTATCAGCAGCAAAGCCTTTAGCGAATTTA TCAGTATATTGAGAGCACAT | 0.43 | LargeWhite, Landrace, Pietrain | SSC6q32.1 | CU442743.3 | WU_in_silico | Martien Groenen | 100 / 70 | |||||||
WU_BX1_151 | CAAGTAACTCATCCGAGATCACACAGCCAT CAAGCAGTACACTCAGCTGC | G/T | AAAGCATAAGGAGGGGCCAGAGATGGGTGG CTTAACACACTTAGGGTGCT | 0.43 | LargeWhite, Landrace, Pietrain | SSC11q16 | CT955974.1 | WU_in_silico | Martien Groenen | 100 / 70 | |||||||
WU_BX1_384 | CTTTTTCCTGCCCTAGTCTATGTTACCTGC TAAAATTCAAAGTCTACAGT | A/C | GTAATGTGGCCTGTCCAGGGCAGAATGTCT GTCATTCTCTTCCTTGTTTT | 0.43 | LargeWhite, Landrace, Pietrain | SSC1p11.2 | CU210944.2 | WU_in_silico | Martien Groenen | 100 / 70 | |||||||
WU_BX1_4 | CTCTTTGGCCTTATCTAATGTAGGCATCAG CACATTTGCTGCTCATTGGT | A/G | GTTAGGGCCCTAGAGTCACTTTAAGGCCCA AGGGTCATAGATTTTTAAAC | 0.44 | LargeWhite, Landrace, Pietrain | SSC7q13 | CU137731.3 | WU_in_silico | Martien Groenen | 100 / 70 | |||||||
WU_BX1_62 | GACTTGAGTAGCAATAGTAACCATGAGAAA GCAAAACCAGGAGCCTTTAA | C/T | GTGGGGAAATATGTTCTAATTTCACACTTC TTTTGTGAAGGGGAACCATA | 0.45 | LargeWhite, Landrace, Pietrain | SSC5q21 | CU407187.7 | WU_in_silico | Martien Groenen | 100 / 70 | |||||||
WU_BX1_275 | AAATATATACCATCTTCAGAGAAAAGAAAT GATGTTTATTGAGCAGTCGC | C/T | CCATTCCAAAGTGTTGTGGGTTTGATGTGT GCAATTCTATTTACTCCCTA | 0.45 | LargeWhite, Landrace, Pietrain | SSC11q12 | CT955958.3 | WU_in_silico | Martien Groenen | 100 / 70 | |||||||
WU_BX1_153 | CTAACACTGGCAAGTGCCATTTTGAAATCC TTCCTCTAGCTTAGTAGCAT | A/G | GGGACCCCAATCAGCCCACCAGCCTGTCTG CACCAGTACTGGGACACCTT | 0.47 | LargeWhite, Landrace, Pietrain | SSC5q21 | CU407187.7 | WU_in_silico | Martien Groenen | 100 / 70 | |||||||
WU_BX1_228 | CCAGTAACTCCAATGACAATGATGTTATTG TGGCTATATTGTAAATGCTG | G/T | TCATGCCCATGTTCAATCCTTTCATCTACA GTCTGAGAAATCAGGATATG | 0.47 | LargeWhite, Landrace, Pietrain | SSC1q21.2 | CU074414.2 | WU_in_silico | Martien Groenen | 100 / 70 | |||||||
WU_BX1_366 | TTATATTGACATGTGATACTGTATATGTGT GCCTATTGTGTGAAGAGCGG | A/G | ATTACAATATGTATGAGAATAATGACTTGC TAACTTTCAGGATTCAAGAG | 0.47 | LargeWhite, Landrace, Pietrain | SSC1p11.1 | CU041245.3 | WU_in_silico | Martien Groenen | 100 / 70 | |||||||
WU_BX1_191 | AGGATATGCAGTGATATTTCAGGTGATAAT AACTGATTTTCTTGTTATTT | G/T | ATGCTCCTAACACCCAAAACTGGGAAAGTA TACCTTAAGTATACTTAATT | 0.48 | LargeWhite, Landrace, Pietrain | SSC1q22.1 | CU463073.2 | WU_in_silico | Martien Groenen | 100 / 70 | |||||||
WU_BX1_180 | ACTTGTTATGCTGTAATCCAGGATGGTGAC GAGTCATCTCCCATTTTAAC | A/G | AGCTTTGAGATAGTGAAAGTTCCTGACCCT CAAATGTCTATGGTGAGTCA | 0.5 | LargeWhite, Landrace, Pietrain | SSC6q31 | CU457391.1 | WU_in_silico | Martien Groenen | 100 / 70 | |||||||
SH028 | Genomic | AAAAATCTGAAAACACAAGTCTTTAGCATC TTTAAGCATGAATATGCAGAGTTTATCTTA | C/T | AATACATGGAACAAGTTATTCTAAAATCTA ATTGGGGAAATAGTCTCACTAGGTGTAGAT | 0.277 | Pietrain, Duroc, Landrace, Large White | |1008638059|"APIP, Intron 2" | By sequencing | Max Rothschild (Du1) | 99 / 50 | |||||||
SH096 | Genomic | GCCTTTAGGTAGAGGAATCAGAGGCTCGGT TATGATATCAGACAGAGAGAAGGTCATACG | A/G | GCTCAGAGTCAGACATAGCTCTGAACCTCT CTAGCCTGTGAAACTTTATGAACAACAACC | 0.004 | Pietrain, Duroc, Landrace, Large White | |CU582930|"CAT, 5'UTR" | By sequencing | Max Rothschild (Du1) | 96 / 50 | |||||||
WU_BX1_54 | GGAGATTGGTGGAACAAGAAAAAGAGAGAT CTGGGCTTAC | A/G | TCTGCTTACTTATTTCTAGGCCATTCAGCC AAATTTAGGA | 0.37 | LargeWhite, Landrace, Pietrain | SSC4q21 | CU138566.4 | WU_in_silico | Martien Groenen | 80 / 70 | |||||||
WU_BX1_142 | GTACCAGATTGTATTAAATGCAAACTGCTT ATTCAAAAGT | C/G | TTCATGGAACAATTCAAAATGCAGAGCAAG AAGGATGAGA | 0.37 | LargeWhite, Landrace, Pietrain | SSC4q22 | CU311186.2 | WU_in_silico | Martien Groenen | 80 / 70 | |||||||
WU_BX1_203 | AAGACAAATGAGATAGTCCAGGAGCTTGGG GCATTGGAAT | C/T | TTTTTTTCTTAATGTCCTTTTCTGTGACAC TTCTGGTTGG | 0.37 | LargeWhite, Landrace, Pietrain | SSC4q21 | CU138566.4 | WU_in_silico | Martien Groenen | 80 / 70 | |||||||
WU_BX1_85 | GCTGGCAGGAAATGAGCATGAGGAACAAAT GCCACTTACT | C/T | CAAGACCACTTATTACTTCTATTCTTCAAT GTTCTTATTC | 0.39 | LargeWhite, Landrace, Pietrain | SSC4q24 | CU302272.2 | WU_in_silico | Martien Groenen | 80 / 70 | |||||||
WU_BX1_2 | GTTAGATTTCAGTGAAAATTATCTTCCAGA GTAGGGTGTT | C/T | TTTTGTTTTTTTTCTACCCCCCCACCCCGG GATTGGGGGG | 0.4 | LargeWhite, Landrace, Pietrain | SSC4 | WU_in_silico | Martien Groenen | 80 / 50 | ||||||||
WU_BX1_39 | TATATCCTTTTAAACCCATGTATCTCAATC TAAATTTGCC | C/T | TCCTCATGTCATTCTGTTATATTTTAGGGT TTTTTCATAA | 0.41 | LargeWhite, Landrace, Pietrain | SSC4q21 | CU179690.6 | WU_in_silico | Martien Groenen | 80 / 70 | |||||||
WU_BX1_226 | TAAGTGATACACTGGGTTGGGGGGGGTGTC AGTTATTCAT | C/T | TGATGTCCTGATGATACGTGCAAACTTTTT CAGAAGAGAC | 0.41 | LargeWhite, Landrace, Pietrain | SSC4q23 | CU407227.3 | WU_in_silico | Martien Groenen | 80 / 70 | |||||||
WU_BX1_287 | AAAAGTGAAACCCCATGTCACACCACTTCT AAATGTTTAA | A/T | AAAGACCACCAGTGAGGGGGTAGCTTACTT TGGCTTCCAG | 0.41 | LargeWhite, Landrace, Pietrain | SSC4q21 | CU076058.15 | WU_in_silico | Martien Groenen | 80 / 70 | |||||||
WU_BX1_8 | TTGATTGTCTTTTTAAAATGCACGTTGGGG TTTTCTGTGT | C/T | CTTGGGATGATTGTGATTTTCAGTTGAAAC CTTCAGGGGT | 0.42 | LargeWhite, Landrace, Pietrain | SSC4q25 | CU179752.5 | WU_in_silico | Martien Groenen | 80 / 70 | |||||||
WU_BX1_146 | ACCAGAGTACAATGAAGTGTACTTCGGAAG TGATACAGCC | C/G | AACTTGGCAAAAGCCTGTCAGTTACTCAAA GACTACCTGC | 0.42 | LargeWhite, Landrace, Pietrain | SSC4q25 | CU305735.34 | WU_in_silico | Martien Groenen | 80 / 70 | |||||||
WU_BX1_9 | GATTTTTTTTTTTTTTAAACTGATGGATGG TGCAGCATGT | C/T | TACATGGTTGTTTGTTGCTAAACTTTATAT AATGTGTGGT | 0.43 | LargeWhite, Landrace, Pietrain | SSC4 | WU_in_silico | Martien Groenen | 80 / 50 | ||||||||
WU_BX1_103 | TGTTCGTATTCAGTGGTAAAGCCAATCTCT TTGGGAACAG | C/T | GCCAGTGAGCTGAATCCTTTCCCCACTCAG CGGGACCCAC | 0.44 | LargeWhite, Landrace, Pietrain | SSC4q25 | CU595636.24 | WU_in_silico | Martien Groenen | 80 / 70 | |||||||
WU_BX1_253 | CAGGCAGTCCTCCAGAGGTTGAGGTATGTC TGAACACAAG | A/G | ACAAATCATTGCCTTCACTGGGATGAGAAA CACTCAGCTT | 0.44 | LargeWhite, Landrace, Pietrain | SSC4q12 | CU179652.2 | WU_in_silico | Martien Groenen | 80 / 70 | |||||||
WU_BX1_42 | ATAGATCTCGAATCTGTCTCACAAGAACAA AGCCACAGAG | A/G | TGGTATGCAGTGCATTCATTATAAATGACA ATGCTTCTAT | 0.46 | LargeWhite, Landrace, Pietrain | SSC4p12 | WU_in_silico | Martien Groenen | 80 / 50 | ||||||||
WU_BX1_160 | GACCCCTTTGCCCACACTGAGCAAACCCCA TCCCAATGCC | A/G | TTCTCATAGCTCTCTCTTTCAAAACTGAAT ACACTTTTCA | 0.47 | LargeWhite, Landrace, Pietrain | SSC4q16 | CU076065.5 | WU_in_silico | Martien Groenen | 80 / 70 | |||||||
WU_BX1_265 | ACTTCCCCTGAGGTTCCTGCAGGAAGATGT TTTTCCTTCC | A/G | GAGCTCGCTCCCCATCTGCACCTTGCTCTG CAGGCAGCTC | 0.48 | LargeWhite, Landrace, Pietrain | SSC4q21 | CU138477.194 | WU_in_silico | Martien Groenen | 80 / 70 | |||||||
WU_BX1_269 | AAAAAAAAAAAAAAAAAAAAAAAAGTGTTT CTCACTACTT | C/T | TGAGACTTTGTCCCAGTGTACAGAATTCTG CAATTCTGAC | 0.49 | LargeWhite, Landrace, Pietrain | SSC4q21 | CU151864.3 | WU_in_silico | Martien Groenen | 80 / 70 | |||||||
WU_BX1_288 | AAATTCCAACTTGTTTTTTCTTTACTCCCA AGTCTCTCTG | A/T | CTGCTTGTTTGTTTTTATGGCCATACCCGT GGCCTCTGGA | 0.49 | LargeWhite, Landrace, Pietrain | SSC4q21 | CU210949.2 | WU_in_silico | Martien Groenen | 80 / 70 | |||||||
WU_BX1_25 | AGCACGGGGAGGAGAGCAGAGTGCAGTTGG CATGTACAGC | C/T | AGCGTGTCCCCAGACATCAGCTCTTCATCG CGGAGCTCCT | 0.51 | LargeWhite, Landrace, Pietrain | SSC4q21 | CU076058.154 | WU_in_silico | Martien Groenen | 80 / 70 | |||||||
SH038 | Genomic | TATGCAGAGTTTATCTTAYAATACATGGAA CACAGTTATTCTAAAATCTAATTGGGGAAA | G/T | AGTCTCACTAGGTGTAGATCTCTGTCTTGC ATGGATGGNNNNNNNNNNNNNNNNNNNNNN | 0.36 | Pietrain, Duroc, Landrace, Large White | |1008638059|"APIP, Intron 2" | By sequencing | Max Rothschild (Du1) | 57 / 50 |
100 Rows queried.