Cattle QTL Database

Release 56
(Apr 24, 2025)

Curator: Cari Park
Curated: 2017-01-20
Updated: 2024-04-23

Publication # 27578198 Details

Authors:	Durán AM, Román Ponce SI, Ruiz López FJ, González Padilla E, Vásquez Peláez CG, Bagnato A, Strillacci MG (Contact: alessandro.bagnato@unimi.it)
Affiliation:	Department of Veterinary Medicine (DiMeVet), University of Milan, Milan, Italy
Title:	Genome-wide association study for milk somatic cell score in holstein cattle using copy number variation as markers
Journal:	Journal Of Animal Breeding And Genetics = Zeitschrift Fur Tierzuchtung Und Zuchtungsbiologie, 134(1):49-59 (2016)	DOI: 10.1111/jbg.12238
Links:	PubMed \| Abstract \|	( Related study: none )
Click on each trait to browse further along the related trait ontology tree Click on each chromosome number to find the detailed QTL information on that chromosome Number of QTL/association reported by traits: QTL for Somatic cell score reported for chromosome(s): Chr.1: Asso:122054, Asso:122078, Asso:122079. Chr.2: Asso:122055, Asso:122080. Chr.3: Asso:122056, Asso:122081, Asso:122082. Chr.4: Asso:122083, Asso:122084. Chr.5: Asso:122057, Asso:122058, Asso:122059, Asso:122085, Asso:122086, Asso:122087, Asso:122088, Asso:122089. Chr.7: Asso:122060, Asso:122090, Asso:122091, Asso:122092, Asso:122093. Chr.10: Asso:122061, Asso:122094, Asso:122095. Chr.11: Asso:122062, Asso:122096, Asso:122097. Chr.12: Asso:122063, Asso:122064, Asso:122065, Asso:122098, Asso:122099, Asso:122100. Chr.13: Asso:122066. Chr.16: Asso:122067, Asso:122101. Chr.17: Asso:122102, Asso:122103, Asso:122104, Asso:122105. Chr.18: Asso:122068, Asso:122106. Chr.19: Asso:122107, Asso:122108, Asso:122109, Asso:122110, Asso:122111, Asso:122112. Chr.20: Asso:122069. Chr.21: Asso:122070, Asso:122113. Chr.22: Asso:122071, Asso:122114. Chr.23: Asso:122072, Asso:122073, Asso:122074, Asso:122115, Asso:122116, Asso:122117, Asso:122118. Chr.24: Asso:122075, Asso:122076. Chr.26: Asso:122119, Asso:122120. Chr.28: Asso:122077, Asso:122121. Chr.29: Asso:122122, Asso:122123, Asso:122124. QTL/association Reported by chromosomes: Chr.1 (3), Chr.2 (2), Chr.3 (3), Chr.4 (2), Chr.5 (8), Chr.7 (5), Chr.10 (3), Chr.11 (3), Chr.12 (6), Chr.13 (1), Chr.16 (2), Chr.17 (4), Chr.18 (2), Chr.19 (6), Chr.20 (1), Chr.21 (2), Chr.22 (2), Chr.23 (7), Chr.24 (2), Chr.26 (2), Chr.28 (2), Chr.29 (3). Number of gene-based eQTL/associations: None

Cite this Dataset:

Animal QTLdb: Dataset from Durán AM, Román Ponce SI, Ruiz López FJ, González Padilla E, Vásquez Peláez CG, Bagnato A, Strillacci MG (2016). Genome-wide association study for milk somatic cell score in holstein cattle using copy number variation as markers. Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie, 134(1):49-59; Curated into QTLdb on 2016-11-18. Universal link to this data set: https://www.animalgenome.org/QTLdb/supp/?t=YcXv0F3MiJ

Durán AM, Román Ponce SI, Ruiz López FJ, González Padilla E, Vásquez Peláez CG, Bagnato A, Strillacci MG (2016). Genome-wide association study for milk somatic cell score in holstein cattle using copy number variation as markers. Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie, 134(1):49-59; DOI: https://dx.doi.org/10.1111/jbg.12238

Publication # 27578198 Details

Number of QTL/association reported by traits:

QTL/association Reported by chromosomes:

Number of gene-based eQTL/associations: