Cattle QTL Database

Release 56
(Apr 24, 2025)

Curator: Cari Park
Curated: 2018-01-09
Updated: 2024-04-23

Publication # 29246110 Details

Authors:	Lopdell TJ, Tiplady K, Struchalin M, Johnson TJJ, Keehan M, Sherlock R, Couldrey C, Davis SR, Snell RG, Spelman RJ, Littlejohn MD (Contact: mlittlejohn@lic.co.nz)
Affiliation:	Research and Development, Livestock Improvement Corporation, Ruakura Road, Newstead, Hamilton, New Zealand
Title:	DNA and RNA-sequence based GWAS highlights membrane-transport genes as key modulators of milk lactose content
Journal:	BMC Genomics, 18(1): 968 (2017)	DOI: 10.1186/s12864-017-4320-3
Links:	PubMed \| Abstract \|	( Related study: none )
Click on each trait to browse further along the related trait ontology tree Click on each chromosome number to find the detailed QTL information on that chromosome Number of QTL/association reported by traits: QTL for Milk lactose content reported for chromosome(s): Chr.1: Asso:147614, Asso:147641. Chr.2: Asso:147615, Asso:147642. Chr.3: Asso:147616, Asso:147617, Asso:147643, Asso:147644. Chr.5: Asso:147618, Asso:147619, Asso:147620, Asso:147645, Asso:147646, Asso:147647. Chr.6: Asso:147621, Asso:147622, Asso:147648, Asso:147649. Chr.7: Asso:147623, Asso:147650. Chr.10: Asso:147624, Asso:147651. Chr.15: Asso:147625, Asso:147652. Chr.16: Asso:147626, Asso:147627, Asso:147653, Asso:147654. Chr.17: Asso:147628, Asso:147655. Chr.19: Asso:147629, Asso:147630, Asso:147631, Asso:147656, Asso:147657, Asso:147658. Chr.20: Asso:147632, Asso:147659. Chr.27: Asso:147633, Asso:147660. Chr.28: Asso:147634, Asso:147661. Chr.29: Asso:147635, Asso:147662. QTL for Milk lactose yield reported for chromosome(s): Chr.5: Asso:147636, Asso:147663. Chr.11: Asso:147637, Asso:147664. Chr.14: Asso:147638, Asso:147665. Chr.20: Asso:147639, Asso:147666. Chr.26: Asso:147640, Asso:147667. QTL for Milk protein percentage reported for chromosome(s): Chr.3: Asso:147668. Chr.5: Asso:147669. Chr.6: Asso:147670. Chr.11: Asso:147671. Chr.14: Asso:147672. Chr.15: Asso:147673. Chr.17: Asso:147674. Chr.19: Asso:147675. Chr.20: Asso:147676. Chr.26: Asso:147677. Chr.29: Asso:147678. QTL for Milk fat percentage reported for chromosome(s): Chr.5: Asso:147679. Chr.6: Asso:147680, Asso:147681. Chr.11: Asso:147682. Chr.14: Asso:147683. Chr.26: Asso:147684. Chr.27: Asso:147685. QTL for Milk yield reported for chromosome(s): Chr.5: Asso:147686. Chr.11: Asso:147687. Chr.14: Asso:147688. Chr.20: Asso:147689. Chr.26: Asso:147690. QTL for Milk protein yield reported for chromosome(s): Chr.5: Asso:147691. Chr.14: Asso:147692. QTL for Milk fat yield reported for chromosome(s): Chr.14: Asso:147693. QTL/association Reported by chromosomes: Chr.1 (2), Chr.2 (2), Chr.3 (5), Chr.5 (12), Chr.6 (7), Chr.7 (2), Chr.10 (2), Chr.11 (5), Chr.14 (7), Chr.15 (3), Chr.16 (4), Chr.17 (3), Chr.19 (7), Chr.20 (6), Chr.26 (5), Chr.27 (3), Chr.28 (2), Chr.29 (3). Number of gene-based eQTL/associations: None

Cite this Dataset:

Animal QTLdb: Dataset from Lopdell TJ, Tiplady K, Struchalin M, Johnson TJJ, Keehan M, Sherlock R, Couldrey C, Davis SR, Snell RG, Spelman RJ, Littlejohn MD (2017). DNA and RNA-sequence based GWAS highlights membrane-transport genes as key modulators of milk lactose content. BMC genomics, 18(1): 968; Curated into QTLdb on 2018-01-09. Universal link to this data set: https://www.animalgenome.org/QTLdb/supp/?t=WaWd1W9HeZ

Lopdell TJ, Tiplady K, Struchalin M, Johnson TJJ, Keehan M, Sherlock R, Couldrey C, Davis SR, Snell RG, Spelman RJ, Littlejohn MD (2017). DNA and RNA-sequence based GWAS highlights membrane-transport genes as key modulators of milk lactose content. BMC genomics, 18(1): 968; DOI: https://dx.doi.org/10.1186/s12864-017-4320-3

Publication # 29246110 Details

Number of QTL/association reported by traits:

QTL/association Reported by chromosomes:

Number of gene-based eQTL/associations: