A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
KRR1 location ⇒ 5:38841775-38841601   CU694568,CH242-210L23,5:38750182-38907661
(Clone quality: bE210L23 on chr=5; Num_of_Contigs=1; )
KRT1 ENSSSCG00000000251 5:16584753-16590165   CU639398,CH242-183O5,5:16561326-16595368
(Clone quality: bE183O5 on chr=5; Num_of_Contigs=7; )
KRT1 location ⇒ 5:16091327-16091220   FP102426,CH242-14F8,5:16082451-16114612
(Clone quality: bE14F8 on chr=5; Num_of_Contigs=8; )
KRT1 location ⇒ 5:16263742-16263673   CU930049,CH242-185F9,5:16262691-16282511
(Clone quality: bE185F9 on chr=5; Num_of_Contigs=28; )
KRT1 location ⇒ 5:16553303-16553184   CU639398,CH242-183O5,5:16541415-16561225
(Clone quality: bE183O5 on chr=5; Num_of_Contigs=7; )
KRT1 location ⇒ 5:16721790-16721875   CU457755,CH242-177O6,5:16699430-16765044
(Clone quality: bE177O6 on chr=5; Num_of_Contigs=3; )
KRT12   ENSSSCG00000017460 12:19408233-19414942   CU694587,CH242-259A15,12:19399848-19430025
(Clone quality: bE259A15 on chr=12; Num_of_Contigs=12; )
KRT13   ENSSSCG00000017445 12:19038490-19042729   CU929492,CH242-164M20,12:19035624-19046234
(Clone quality: bE164M20 on chr=12; Num_of_Contigs=5; )
KRT14   ENSSSCG00000017433 12:18816654-18821932    
KRT15 ENSSSCG00000017444 12:19023774-19029319   CU929492,CH242-164M20,12:19023552-19035523
(Clone quality: bE164M20 on chr=12; Num_of_Contigs=5; )
KRT15 location ⇒ 12:18797280-18797388   CU972362,CH242-2B19,12:18797232-18811598
(Clone quality: bE2B19 on chr=12; Num_of_Contigs=14; )
KRT15 location ⇒ 12:18799657-18799749   CU972362,CH242-2B19,12:18797232-18811598
(Clone quality: bE2B19 on chr=12; Num_of_Contigs=14; )
KRT15 location ⇒ 12:18819221-18819329   CU972362,CH242-2B19,12:18818073-18820793
(Clone quality: bE2B19 on chr=12; Num_of_Contigs=14; )
KRT15 location ⇒ 12:19562553-19562473   CU856162,CH242-340B15,12:19560586-19563120
(Clone quality: bE340B15 on chr=12; Num_of_Contigs=24; )
KRT19   ENSSSCG00000017448 12:19087382-19090673   CU929492,CH242-164M20,12:19074070-19091009
(Clone quality: bE164M20 on chr=12; Num_of_Contigs=5; )
KRT2 location ⇒ 5:16263742-16263663   CU930049,CH242-185F9,5:16262691-16282511
(Clone quality: bE185F9 on chr=5; Num_of_Contigs=28; )
KRT2 location ⇒ 5:16332095-16332183   CU930049,CH242-185F9,5:16326345-16335159
(Clone quality: bE185F9 on chr=5; Num_of_Contigs=28; )
KRT2 location ⇒ 5:16415726-16415814   CU930049,CH242-185F9,5:16403615-16421694
(Clone quality: bE185F9 on chr=5; Num_of_Contigs=28; )
KRT2 location ⇒ 5:16665895-16665784   CU457755,CH242-177O6,5:16641180-16699329
(Clone quality: bE177O6 on chr=5; Num_of_Contigs=3; )
KRT20   ENSSSCG00000017459 12:19392090-19401272    
KRT222P   ENSSSCG00000017469 12:19630631-19635756   CU856162,CH242-340B15,12:19626505-19637136
(Clone quality: bE340B15 on chr=12; Num_of_Contigs=24; )
KRT24   ENSSSCG00000017465 12:19559222-19562856    
KRT26   ENSSSCG00000017463 12:19494970-19501621   CU694587,CH242-259A15,12:19473068-19511302
(Clone quality: bE259A15 on chr=12; Num_of_Contigs=12; )
KRT27   ENSSSCG00000017462 12:19482935-19488062   CU694587,CH242-259A15,12:19473068-19511302
(Clone quality: bE259A15 on chr=12; Num_of_Contigs=12; )
KRT28   ENSSSCG00000017461 12:19464951-19475221    
KRT32   ENSSSCG00000017439 12:18939882-18947879    
KRT35   ENSSSCG00000017438 12:18929347-18934428    
KRT36   ENSSSCG00000017437 12:18918819-18922243   CU929492,CH242-164M20,12:18918226-18922837
(Clone quality: bE164M20 on chr=12; Num_of_Contigs=5; )
KRT39   ENSSSCG00000017458 12:19300617-19308530    
KRT40   ENSSSCG00000017457 12:19289976-19297267   CU928374,CH242-386E10,12:19276707-19297300
(Clone quality: bE386E10 on chr=12; Num_of_Contigs=17; )
KRT5   ENSSSCG00000000248 5:16499553-16505708   CU639398,CH242-183O5,5:16493010-16507379
(Clone quality: bE183O5 on chr=5; Num_of_Contigs=7; )
KRT73   ENSSSCG00000000247 5:16449670-16471717    
KRT8 ENSSSCG00000000252 5:16714898-16722754   CU457755,CH242-177O6,5:16699430-16765044
(Clone quality: bE177O6 on chr=5; Num_of_Contigs=3; )
KRT82   ENSSSCG00000000235 5:16090026-16104164   FP102426,CH242-14F8,5:16082451-16114612
(Clone quality: bE14F8 on chr=5; Num_of_Contigs=8; )
KRT84   ENSSSCG00000000241 5:16251992-16259862   FP102426,CH242-14F8,5:16192548-16262690
(Clone quality: bE14F8 on chr=5; Num_of_Contigs=8; )
KRT85   ENSSSCG00000000240 5:16232746-16239439   FP102426,CH242-14F8,5:16192548-16262690
(Clone quality: bE14F8 on chr=5; Num_of_Contigs=8; )
KRT8P12   ENSSSCG00000000238 5:16170681-16171232   FP102426,CH242-14F8,5:16166246-16175739
(Clone quality: bE14F8 on chr=5; Num_of_Contigs=8; )
KRTAP17-1   ENSSSCG00000017443 12:19007887-19008240   CU929492,CH242-164M20,12:19004894-19023451
(Clone quality: bE164M20 on chr=12; Num_of_Contigs=5; )
KRTAP3-1   ENSSSCG00000017450 12:19170645-19170941   CU928374,CH242-386E10,12:19158638-19198282
(Clone quality: bE386E10 on chr=12; Num_of_Contigs=17; )
KRTAP4-2   ENSSSCG00000017449 12:19112319-19137386    
KRTCAP2   ENSSSCG00000006527 4:98722090-98725312   CU179666,CH242-242M24,4:98705913-98751478
(Clone quality: bE242M24 on chr=4; Num_of_Contigs=7; )
KRTDAP   ENSSSCG00000002882 6:29986358-29989973   CU694505,CH242-50N19,6:29976458-30017276
(Clone quality: bE50N19 on chr=6; Num_of_Contigs=14; )
KRTHB1 location ⇒ 5:16177994-16177776   FP102426,CH242-14F8,5:16175840-16179655
(Clone quality: bE14F8 on chr=5; Num_of_Contigs=8; )
KRTHB1 location ⇒ 5:16449891-16449679   CU639398,CH242-183O5,5:16437659-16467604
(Clone quality: bE183O5 on chr=5; Num_of_Contigs=7; )
KRTHB1 location ⇒ 5:16620974-16620750   CU457755,CH242-177O6,5:16595369-16641079
(Clone quality: bE177O6 on chr=5; Num_of_Contigs=3; )
KRTHB1 location ⇒ 5:16649697-16649476   CU457755,CH242-177O6,5:16641180-16699329
(Clone quality: bE177O6 on chr=5; Num_of_Contigs=3; )
KSR1   ENSSSCG00000017753 12:41967617-42030599    
KSR2   ENSSSCG00000009855 14:34908689-35328918    
KTELC1   ENSSSCG00000011897 13:105466741-105470918   CU469375,CH242-436O17,13:105461008-105471978
(Clone quality: bE436O17 on chr=13; Num_of_Contigs=26; )
KTN1   ENSSSCG00000005060 1:193456356-193558185    
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-1

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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