A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
Q000W9_PIG   ENSSSCG00000013642 2:52940179-52941476   CU993813,CH242-86K24,2:52937567-52943390
(Clone quality: bE86K24 on chr=2; Num_of_Contigs=13; )
Q09N05_PIG   ENSSSCG00000006118 4:46261306-46261446   CU179727,CH242-91N10,4:46257070-46271825
(Clone quality: bE91N10 on chr=4; Num_of_Contigs=20; )
Q09N05_PIG   ENSSSCG00000006117 4:46189559-46189699   FP089561,CH242-272E5,4:46173974-46206053
(Clone quality: bE272E5 on chr=4; Num_of_Contigs=5; )
Q0GC45_PIG   ENSSSCG00000005147 1:210148003-210148572   CU618316,CH242-254N10,1:210132941-210188533
(Clone quality: bE254N10 on chr=1; Num_of_Contigs=2; )
Q0GFA4_PIG   ENSSSCG00000016573 18:17836661-17842820   CU928618,CH242-79D19,18:17819272-17900722
(Clone quality: bE79D19 on chr=18; Num_of_Contigs=3; )
Q0GFA6_PIG   ENSSSCG00000003179 6:38194759-38195469   FP102630,CH242-21M22,6:38193113-38201419
(Clone quality: bE21M22 on chr=6; Num_of_Contigs=8; )
Q0KKC1_PIG   ENSSSCG00000003911 6:118355220-118364727   CU464168,CH242-477B24,6:118349288-118384356
(Clone quality: bE477B24 on chr=6; Num_of_Contigs=7; )
Q0KKC1_PIG   ENSSSCG00000003907 6:118271855-118280837   CU694667,CH242-117A15,6:118247749-118318723
(Clone quality: bE117A15 on chr=6; Num_of_Contigs=3; )
Q0Q4H0_PIG   ENSSSCG00000012935 2:4133239-4138442   CU928093,CH242-168G1,2:4131589-4155461
(Clone quality: bE168G1 on chr=2; Num_of_Contigs=25; )
Q0Q4H0_PIG   ENSSSCG00000012949 2:4418288-4423491   CU928034,CH242-426E24,2:4401193-4424111
(Clone quality: bE426E24 on chr=2; Num_of_Contigs=5; )
Q0W959_PIG   ENSSSCG00000010269 14:76503992-76511339   CT737240,CH242-107C23,14:76500681-76511473
(Clone quality: bE107C23 on chr=14; Num_of_Contigs=2; )
Q0W959_PIG   ENSSSCG00000010265 14:76258016-76259885    
Q0Z8R0_PIG   ENSSSCG00000007127 17:32063719-32067456   CU606898,CH242-256N2,17:31905701-32110440
(Clone quality: bE256N2 on chr=17; Num_of_Contigs=3; )
Q0Z8R0_PIG   ENSSSCG00000007128 17:32216931-32220668   CU855486,CH242-118N5,17:32216750-32231251
(Clone quality: bE118N5 on chr=17; Num_of_Contigs=6; )
Q0ZHH8_PIG   ENSSSCG00000005231 1:229483388-229527928    
Q15I74_PIG   ENSSSCG00000004321 1:60406108-60407557   FP089480,CH242-211K7,1:60401400-60412897
(Clone quality: bE211K7 on chr=1; Num_of_Contigs=6; )
Q15I76_PIG   ENSSSCG00000004286 1:55454543-55455298   CU468562,CH242-237C6,1:55449741-55460129
(Clone quality: bE237C6 on chr=1; Num_of_Contigs=16; )
Q19QS7_PIG   ENSSSCG00000003782 6:97349551-97349622   CU694582,CH242-24J21,6:97282752-97368371
(Clone quality: bE24J21 on chr=6; Num_of_Contigs=3; )
Q1HCN5_PIG   ENSSSCG00000018040 12:56456866-56458625   CU467081,CH242-221I17,12:56431900-56466220
(Clone quality: bE221I17 on chr=12; Num_of_Contigs=15; )
Q1HE50_PIG   ENSSSCG00000011155 10:62288198-62301350    
Q1HGG8_PIG   ENSSSCG00000005321 1:247602373-247602768   CU074289,CH242-130G19,1:247583036-247668986
(Clone quality: bE130G19 on chr=1; Num_of_Contigs=3; )
Q1HNM7_PIG   ENSSSCG00000017579 12:24667625-24687958    
Q1KLB2_PIG   ENSSSCG00000011149 10:61989052-62035989   CU972427,CH242-23K3,10:61914453-62050813
(Clone quality: bE23K3 on chr=10; Num_of_Contigs=1; )
Q1KLB2_PIG   ENSSSCG00000011149 10:61989052-62035989   CU972427,CH242-23K3,10:61914453-62050813
(Clone quality: bE23K3 on chr=10; Num_of_Contigs=1; )
Q1KLB2_PIG   ENSSSCG00000011154 10:62258095-62305073    
Q1KLB2_PIG   ENSSSCG00000011154 10:62258095-62305073    
Q1KLB3_PIG   ENSSSCG00000011148 10:61969145-61978751   CU972427,CH242-23K3,10:61914453-62050813
(Clone quality: bE23K3 on chr=10; Num_of_Contigs=1; )
Q1KLB4_PIG   ENSSSCG00000011147 10:61919179-61933764   CU972427,CH242-23K3,10:61914453-62050813
(Clone quality: bE23K3 on chr=10; Num_of_Contigs=1; )
Q1KNJ3_PIG   ENSSSCG00000005153 1:210334733-210335278   CU651597,CH242-112J16,1:210311258-210361052
(Clone quality: bE112J16 on chr=1; Num_of_Contigs=9; )
Q1KNJ3_PIG   ENSSSCG00000005148 1:210188837-210189382   CU618316,CH242-254N10,1:210188634-210217788
(Clone quality: bE254N10 on chr=1; Num_of_Contigs=2; )
Q1RLJ4_PIG   ENSSSCG00000007218 17:36991196-36993856    
Q1RLJ4_PIG   ENSSSCG00000007209 17:36727796-36730973   CU606854,CH242-254I19,17:36724988-36731184
(Clone quality: bE254I19 on chr=17; Num_of_Contigs=11; )
Q1RLJ4_PIG   ENSSSCG00000007209 17:36727796-36730973   CU606854,CH242-254I19,17:36724988-36731184
(Clone quality: bE254I19 on chr=17; Num_of_Contigs=11; )
Q1T7A4_PIG   ENSSSCG00000016326 15:129515992-129519077   CU570741,CH242-330M24,15:129495865-129527332
(Clone quality: bE330M24 on chr=15; Num_of_Contigs=4; )
Q1T7A5_PIG   ENSSSCG00000016327 15:129535891-129540254   CU570741,CH242-330M24,15:129527433-129541454
(Clone quality: bE330M24 on chr=15; Num_of_Contigs=4; )
Q1W0X9_PIG   ENSSSCG00000015003 9:35785249-35785341   CU928597,CH242-212P11,9:35781186-35790454
(Clone quality: bE212P11 on chr=9; Num_of_Contigs=11; )
Q1WMM4_PIG   ENSSSCG00000013234 2:13168336-13169156   CU856312,CH242-38I7,2:13166080-13170202
(Clone quality: bE38I7 on chr=2; Num_of_Contigs=10; )
Q27HS5_PIG   ENSSSCG00000001874 7:63147988-63152844   CU468711,CH242-466M21,7:63127064-63167395
(Clone quality: bE466M21 on chr=7; Num_of_Contigs=6; )
Q27HS5_PIG   ENSSSCG00000001873 7:63137801-63211817    
Q28950_PIG   ENSSSCG00000006804 4:114070676-114081409    
Q28952_PIG   ENSSSCG00000013288 2:23145420-23145602 FP102503,CH242-427N16,2:23115394-23146726
(Clone quality: bE427N16 on chr=2; Num_of_Contigs=4; ) 		 
Q28954_PIG   ENSSSCG00000002249 7:88627007-88942046    
Q28954_PIG   ENSSSCG00000002248 7:88419834-88516984    
Q28966_PIG   ENSSSCG00000015389 9:86467290-86529952    
Q28971_PIG   ENSSSCG00000010487 14:111449319-111484329   CU468555,CH242-152J23,14:111432294-111533070
(Clone quality: bE152J23 on chr=14; Num_of_Contigs=10; )
Q28981_PIG   ENSSSCG00000014402 2:131695631-131695789 CU928713,CH242-105G5,2:131650489-131785120
(Clone quality: bE105G5 on chr=2; Num_of_Contigs=5; ) 		 
Q29001_PIG   ENSSSCG00000004043 1:8463335-8464717   FP017297,CH242-205C17,1:8454529-8465768
(Clone quality: bE205C17 on chr=1; Num_of_Contigs=7; )
Q29021_PIG   ENSSSCG00000008596 3:109165506-109174258   CU469157,CH242-319L3,3:109165490-109174495
(Clone quality: bE319L3 on chr=3; Num_of_Contigs=2; )
Q29022_PIG   ENSSSCG00000008595 3:109052838-109076900    
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-35

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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