A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
M6PR ENSSSCG00000000662 5:59228332-59239308    
M6PR location ⇒ 5:59228852-59228359   CU457451,CH242-327I6,5:59221480-59231815
(Clone quality: bE327I6 on chr=5; Num_of_Contigs=5; )
M6PR location ⇒ 5:59232870-59232698   CU457451,CH242-327I6,5:59231916-59245147
(Clone quality: bE327I6 on chr=5; Num_of_Contigs=5; )
M6PR location ⇒ 5:59233787-59233608   CU457451,CH242-327I6,5:59231916-59245147
(Clone quality: bE327I6 on chr=5; Num_of_Contigs=5; )
M6PR location ⇒ 5:59239079-59238909   CU457451,CH242-327I6,5:59231916-59245147
(Clone quality: bE327I6 on chr=5; Num_of_Contigs=5; )
MAB21L1   ENSSSCG00000009351 11:11127592-11128671   CU633425,CH242-505M2,11:11118744-11172074
(Clone quality: bE505M2 on chr=11; Num_of_Contigs=3; )
MAB21L2   ENSSSCG00000009022 8:67524886-67525965   CU672255,CH242-44J17,8:67508568-67579116
(Clone quality: bE44J17 on chr=8; Num_of_Contigs=1; )
MACF1   ENSSSCG00000003654 6:64971378-65337131    
MACROD1   ENSSSCG00000013043 2:6311471-6461264    
MAD ENSSSCG00000008334 3:66565696-66568609   CU928518,CH242-218L8,3:66507509-66569098
(Clone quality: bE218L8 on chr=3; Num_of_Contigs=8; )
MAD ENSSSCG00000004505 1:101093768-101104311   CU062588,CH242-5J4,1:101076578-101106690
(Clone quality: bE5J4 on chr=1; Num_of_Contigs=16; )
MAD2L1   ENSSSCG00000009104 8:89570803-89580044   CU638686,CH242-511I21,8:89441314-89612797
(Clone quality: bE511I21 on chr=8; Num_of_Contigs=2; )
MAD2L2   ENSSSCG00000003419 6:48609052-48614571   CU855519,CH242-273H12,6:48607450-48632349
(Clone quality: bE273H12 on chr=6; Num_of_Contigs=13; )
MADD ENSSSCG00000013235 2:13171535-13335597    
MADD ENSSSCG00000005170 1:212297948-212451085    
MADD ENSSSCG00000013546 2:49940368-50080340    
MADD ENSSSCG00000005585 1:278846563-279456646    
MADD ENSSSCG00000006568 4:99978615-99990851   CU407290,CH242-513B13,4:99976554-99996207
(Clone quality: bE513B13 on chr=4; Num_of_Contigs=7; )
MADD ENSSSCG00000006797 4:113553784-113568329   CU468595,CH242-175A23,4:113550530-113589133
(Clone quality: bE175A23 on chr=4; Num_of_Contigs=4; )
MADH1 location ⇒ 8:71566689-71566253   CU582970,CH242-283K1,8:71558566-71569226
(Clone quality: bE283K1 on chr=8; Num_of_Contigs=8; )
MADH1 location ⇒ 8:71570893-71570634   CU582970,CH242-283K1,8:71569327-71574436
(Clone quality: bE283K1 on chr=8; Num_of_Contigs=8; )
MADH1 location ⇒ 8:71584832-71584574   CU582970,CH242-283K1,8:71577040-71587792
(Clone quality: bE283K1 on chr=8; Num_of_Contigs=8; )
MADH1 location ⇒ 8:71612705-71612127   CU582970,CH242-283K1,8:71610183-71614704
(Clone quality: bE283K1 on chr=8; Num_of_Contigs=8; )
MAEL_PIG   ENSSSCG00000006315 4:87330578-87333480   CU570903,CH242-111C5,4:87330380-87334824
(Clone quality: bE111C5 on chr=4; Num_of_Contigs=18; )
MAF ENSSSCG00000000109 5:6044552-6045625 BX296548,PigE-193I9,5:5978065-6150316
(Clone quality: bT193I9 on chr=5; Num_of_Contigs=8; ) 		 
MAF ENSSSCG00000007559 3:783591-784877   FP103050,CH242-177C19,3:775729-794303
(Clone quality: bE177C19 on chr=3; Num_of_Contigs=4; )
MAF ENSSSCG00000007353 17:45324476-45324982   CU683884,CH242-185F5,17:45313429-45325277
(Clone quality: bE185F5 on chr=17; Num_of_Contigs=16; )
MAF ENSSSCG00000002010 7:81549688-81551388   CT961055,CH242-32K2,7:81442434-81553552
(Clone quality: bE32K2 on chr=7; Num_of_Contigs=2; )
MAF1 ENSSSCG00000005915 4:592686-595749   FP085492,CH242-176F2,4:573710-645862
(Clone quality: bE176F2 on chr=4; Num_of_Contigs=15; )
MAF1 location ⇒ 4:592861-593059   FP085492,CH242-176F2,4:573710-645862
(Clone quality: bE176F2 on chr=4; Num_of_Contigs=15; )
MAF1 location ⇒ 4:594040-594171   FP085492,CH242-176F2,4:573710-645862
(Clone quality: bE176F2 on chr=4; Num_of_Contigs=15; )
MAF1 location ⇒ 4:594244-594416   FP085492,CH242-176F2,4:573710-645862
(Clone quality: bE176F2 on chr=4; Num_of_Contigs=15; )
MAF1 location ⇒ 4:595238-595747   FP085492,CH242-176F2,4:573710-645862
(Clone quality: bE176F2 on chr=4; Num_of_Contigs=15; )
MafB ENSSSCG00000007353 17:45324476-45324982   CU683884,CH242-185F5,17:45313429-45325277
(Clone quality: bE185F5 on chr=17; Num_of_Contigs=16; )
MAFB ENSSSCG00000007353 17:45324476-45324982   CU683884,CH242-185F5,17:45313429-45325277
(Clone quality: bE185F5 on chr=17; Num_of_Contigs=16; )
MafB location ⇒ 17:45323431-45322559   CU683884,CH242-185F5,17:45313429-45325277
(Clone quality: bE185F5 on chr=17; Num_of_Contigs=16; )
MafB location ⇒ 17:45324291-45323494   CU683884,CH242-185F5,17:45313429-45325277
(Clone quality: bE185F5 on chr=17; Num_of_Contigs=16; )
MafB location ⇒ 17:45324964-45324470   CU683884,CH242-185F5,17:45313429-45325277
(Clone quality: bE185F5 on chr=17; Num_of_Contigs=16; )
MafB location ⇒ 17:45510825-45511161   CU633421,CH242-485E16,17:45510760-45539896
(Clone quality: bE485E16 on chr=17; Num_of_Contigs=15; )
MAFF ENSSSCG00000000109 5:6044552-6045625 BX296548,PigE-193I9,5:5978065-6150316
(Clone quality: bT193I9 on chr=5; Num_of_Contigs=8; ) 		 
MAFF location ⇒ 4:591603-591524   FP085492,CH242-176F2,4:573710-645862
(Clone quality: bE176F2 on chr=4; Num_of_Contigs=15; )
MAFF location ⇒ 4:593089-592495   FP085492,CH242-176F2,4:573710-645862
(Clone quality: bE176F2 on chr=4; Num_of_Contigs=15; )
MAFK   ENSSSCG00000007559 3:783591-784877   FP103050,CH242-177C19,3:775729-794303
(Clone quality: bE177C19 on chr=3; Num_of_Contigs=4; )
MAG ENSSSCG00000002887 6:30048491-30055357   CU694505,CH242-50N19,6:30044935-30056686
(Clone quality: bE50N19 on chr=6; Num_of_Contigs=14; )
MAG ENSSSCG00000009233 8:116033227-116095009    
MAG location ⇒ 6:30053509-30053738   CU694505,CH242-50N19,6:30044935-30056686
(Clone quality: bE50N19 on chr=6; Num_of_Contigs=14; )
MAG location ⇒ 6:30055098-30055358   CU694505,CH242-50N19,6:30044935-30056686
(Clone quality: bE50N19 on chr=6; Num_of_Contigs=14; )
MAG location ⇒ 6:30136178-30135891   CU694505,CH242-50N19,6:30135817-30139902
(Clone quality: bE50N19 on chr=6; Num_of_Contigs=14; )
MAGEA3 location ⇒ X:31251966-31252036 CU928381,CH242-112D2,X:31213123-31338044
(Clone quality: bE112D2 on chr=X; Num_of_Contigs=3; ) 		 
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-1150, 1151-1200, 1201-1250, 1251-1300, 1301-1350, 1351-1400, 1401-46

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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