A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
LRIG3 ENSSSCG00000000455 5:23056590-23129888    
LRIG3 location ⇒ 5:23074886-23074742   CU571238,CH242-78J16,5:23055061-23100439
(Clone quality: bE78J16 on chr=5; Num_of_Contigs=7; )
LRIG3 location ⇒ 5:23075438-23075294   CU571238,CH242-78J16,5:23055061-23100439
(Clone quality: bE78J16 on chr=5; Num_of_Contigs=7; )
LRIG3 location ⇒ 5:23075900-23075756   CU571238,CH242-78J16,5:23055061-23100439
(Clone quality: bE78J16 on chr=5; Num_of_Contigs=7; )
LRIG3 location ⇒ 5:23077037-23076894   CU571238,CH242-78J16,5:23055061-23100439
(Clone quality: bE78J16 on chr=5; Num_of_Contigs=7; )
LRIT1   ENSSSCG00000010349 14:88917283-88927664   CU607038,CH242-240O5,14:88865868-89075009
(Clone quality: bE240O5 on chr=14; Num_of_Contigs=1; )
LRIT2   ENSSSCG00000010347 14:88796298-88911177    
LRIT3   ENSSSCG00000009135 8:96522141-96538078   CU463265,CH242-237G17,8:96455649-96640359
(Clone quality: bE237G17 on chr=8; Num_of_Contigs=1; )
LRMP ENSSSCG00000000563 5:47089503-47165071    
LRP ENSSSCG00000000423 5:21397928-21413617   CU633428,CH242-524E23,5:21392304-21414238
(Clone quality: bE524E23 on chr=5; Num_of_Contigs=9; )
LRP ENSSSCG00000008452 3:89869226-89986979    
LRP ENSSSCG00000011266 13:19815582-19817564    
LRP ENSSSCG00000007166 17:34211675-34370646    
LRP ENSSSCG00000015675 15:6853084-6897253    
LRP1 ENSSSCG00000016257 15:122934762-122934911   CU550652,CH242-134E9,15:122917809-122951925
(Clone quality: bE134E9 on chr=15; Num_of_Contigs=5; )
LRP1 ENSSSCG00000000423 5:21397928-21413617   CU633428,CH242-524E23,5:21392304-21414238
(Clone quality: bE524E23 on chr=5; Num_of_Contigs=9; )
LRP1 ENSSSCG00000008354 3:68165515-68181331   CU915705,CH242-440I14,3:68131955-68208627
(Clone quality: bE440I14 on chr=3; Num_of_Contigs=1; )
LRP1 location ⇒ 5:21425483-21425681   CU633428,CH242-524E23,5:21420451-21428113
(Clone quality: bE524E23 on chr=5; Num_of_Contigs=9; )
LRP1 location ⇒ 5:21425907-21426039   CU633428,CH242-524E23,5:21420451-21428113
(Clone quality: bE524E23 on chr=5; Num_of_Contigs=9; )
LRP1 location ⇒ 5:21426533-21426761   CU633428,CH242-524E23,5:21420451-21428113
(Clone quality: bE524E23 on chr=5; Num_of_Contigs=9; )
LRP1 location ⇒ 5:21426989-21427167   CU633428,CH242-524E23,5:21420451-21428113
(Clone quality: bE524E23 on chr=5; Num_of_Contigs=9; )
LRP10 location ⇒ 6:28691525-28691639   CU638683,CH242-3F10,6:28679939-28721948
(Clone quality: bE3F10 on chr=6; Num_of_Contigs=8; )
LRP11   ENSSSCG00000004101 1:17097535-17156304    
LRP12   ENSSSCG00000006039 4:32930091-33006933    
LRP2 ENSSSCG00000015792 15:43666471-43848616    
LRP2 ENSSSCG00000015928 15:71074340-71091726   CU915387,CH242-209P21,15:71068430-71151448
(Clone quality: bE209P21 on chr=15; Num_of_Contigs=5; )
LRP2 location ⇒ 15:71113033-71112867   CU915387,CH242-209P21,15:71068430-71151448
(Clone quality: bE209P21 on chr=15; Num_of_Contigs=5; )
LRP2 location ⇒ 15:71115378-71115246   CU915387,CH242-209P21,15:71068430-71151448
(Clone quality: bE209P21 on chr=15; Num_of_Contigs=5; )
LRP2 location ⇒ 15:71116439-71116218   CU915387,CH242-209P21,15:71068430-71151448
(Clone quality: bE209P21 on chr=15; Num_of_Contigs=5; )
LRP2 location ⇒ 15:71117324-71117221   CU915387,CH242-209P21,15:71068430-71151448
(Clone quality: bE209P21 on chr=15; Num_of_Contigs=5; )
LRP2BP   ENSSSCG00000015792 15:43666471-43848616    
LRP3   ENSSSCG00000002863 6:28680151-28692823   CU638683,CH242-3F10,6:28679939-28721948
(Clone quality: bE3F10 on chr=6; Num_of_Contigs=8; )
LRP4   ENSSSCG00000013248 2:13667626-13706373   CU928982,CH242-105I3,2:13664362-13711568
(Clone quality: bE105I3 on chr=2; Num_of_Contigs=9; )
LRP5   ENSSSCG00000012885 2:2885875-3062096    
LRP6   ENSSSCG00000000625 5:57440187-57533015    
LRP8 ENSSSCG00000003848 6:112794299-112870728    
LRP8 location ⇒ 6:112849100-112849278   FP245512,CH242-182E9,6:112834675-112857871
(Clone quality: bE182E9 on chr=6; Num_of_Contigs=5; )
LRP8 location ⇒ 6:112853632-112853773   FP245512,CH242-182E9,6:112834675-112857871
(Clone quality: bE182E9 on chr=6; Num_of_Contigs=5; )
LRP8 location ⇒ 6:112855416-112855559   FP245512,CH242-182E9,6:112834675-112857871
(Clone quality: bE182E9 on chr=6; Num_of_Contigs=5; )
LRP8 location ⇒ 6:112857237-112857391   FP245512,CH242-182E9,6:112834675-112857871
(Clone quality: bE182E9 on chr=6; Num_of_Contigs=5; )
LRPAP1 ENSSSCG00000008701 8:1463343-1489596    
LRPAP1 location ⇒ 8:1463716-1463535   CU694640,CH242-5O13,8:1461153-1466999
(Clone quality: bE5O13 on chr=8; Num_of_Contigs=13; )
LRPAP1 location ⇒ 8:1465940-1465780   CU694640,CH242-5O13,8:1461153-1466999
(Clone quality: bE5O13 on chr=8; Num_of_Contigs=13; )
LRPAP1 location ⇒ 8:1489560-1489343   CU915501,CH242-408L20,8:1481245-1490254
(Clone quality: bE408L20 on chr=8; Num_of_Contigs=7; )
LRPAP1 location ⇒ 8:1585655-1585287   CU915501,CH242-408L20,8:1583345-1587423
(Clone quality: bE408L20 on chr=8; Num_of_Contigs=7; )
LRPPRC   ENSSSCG00000008452 3:89869226-89986979    
LRRC1 ENSSSCG00000001486 7:31289060-31334952   CU468862,CH242-13D16,7:31196163-31361567
(Clone quality: bE13D16 on chr=7; Num_of_Contigs=1; )
LRRC1 location ⇒ 7:31289660-31289084   CU468862,CH242-13D16,7:31196163-31361567
(Clone quality: bE13D16 on chr=7; Num_of_Contigs=1; )
LRRC1 location ⇒ 7:31292076-31291938   CU468862,CH242-13D16,7:31196163-31361567
(Clone quality: bE13D16 on chr=7; Num_of_Contigs=1; )
LRRC1 location ⇒ 7:31293332-31293157   CU468862,CH242-13D16,7:31196163-31361567
(Clone quality: bE13D16 on chr=7; Num_of_Contigs=1; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-45

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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