A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
LRRC4C location ⇒ 2:21588374-21588266 CU914277,CH242-408B4,2:21581321-21589068
(Clone quality: bE408B4 on chr=2; Num_of_Contigs=4; ) 		 
LRRC4C location ⇒ 2:43402147-43402041   CU469288,CH242-308B8,2:43371798-43488290
(Clone quality: bE308B8 on chr=2; Num_of_Contigs=7; )
LRRC4C location ⇒ 2:58446084-58446180   CU915588,CH242-212D24,2:58405852-58499395
(Clone quality: bE212D24 on chr=2; Num_of_Contigs=5; )
LRRC50   ENSSSCG00000002675 6:2853521-3062152    
LRRC51   ENSSSCG00000014803 9:6069351-6108112    
LRRC57   ENSSSCG00000004726 1:135138453-135144910   CU929677,CH242-104I21,1:135136760-135189683
(Clone quality: bE104I21 on chr=1; Num_of_Contigs=5; )
LRRC58   ENSSSCG00000011887 13:104662327-104667438   CU928379,CH242-64G16,13:104661538-104692449
(Clone quality: bE64G16 on chr=13; Num_of_Contigs=3; )
LRRC59   ENSSSCG00000017570 12:24292491-24307183    
LRRC6 ENSSSCG00000005952 4:7476661-7549857    
LRRC6 location ⇒ 4:7489373-7489540   CU138495,CH242-54A10,4:7482907-7599365
(Clone quality: bE54A10 on chr=4; Num_of_Contigs=3; )
LRRC6 location ⇒ 4:7493111-7493190   CU138495,CH242-54A10,4:7482907-7599365
(Clone quality: bE54A10 on chr=4; Num_of_Contigs=3; )
LRRC6 location ⇒ 4:7502912-7503086   CU138495,CH242-54A10,4:7482907-7599365
(Clone quality: bE54A10 on chr=4; Num_of_Contigs=3; )
LRRC6 location ⇒ 4:7507900-7508098   CU138495,CH242-54A10,4:7482907-7599365
(Clone quality: bE54A10 on chr=4; Num_of_Contigs=3; )
LRRC62   ENSSSCG00000000131 5:6975760-6978216   CU915640,CH242-153F17,5:6972468-7004542
(Clone quality: bE153F17 on chr=5; Num_of_Contigs=5; )
LRRC63   ENSSSCG00000009411 11:20463433-20508387    
LRRC66   ENSSSCG00000008832 8:33669859-33686871   CU928766,CH242-128N5,8:33662044-33745367
(Clone quality: bE128N5 on chr=8; Num_of_Contigs=5; )
LRRC67   ENSSSCG00000006204 4:70266873-70308578    
LRRC69   ENSSSCG00000006119 4:46306617-46306802 CU179670,CH242-299E13,4:46296919-46490242
(Clone quality: bE299E13 on chr=4; Num_of_Contigs=2; ) 		 
LRRC7   ENSSSCG00000003793 6:100505356-100631067    
LRRC8 ENSSSCG00000005664 1:283903161-283911548 CU076102,CH242-68C14,1:283855073-284074390
(Clone quality: bE68C14 on chr=1; Num_of_Contigs=6; ) 		 
LRRC8 location ⇒ 1:283905053-283905317 CU076102,CH242-68C14,1:283855073-284074390
(Clone quality: bE68C14 on chr=1; Num_of_Contigs=6; ) 		 
LRRC8 location ⇒ 1:283910973-283911548 CU076102,CH242-68C14,1:283855073-284074390
(Clone quality: bE68C14 on chr=1; Num_of_Contigs=6; ) 		 
LRRC8A   ENSSSCG00000005664 1:283903161-283911548 CU076102,CH242-68C14,1:283855073-284074390
(Clone quality: bE68C14 on chr=1; Num_of_Contigs=6; ) 		 
LRRC8C   ENSSSCG00000006917 4:131507338-131583207    
LRRC8E   ENSSSCG00000013586 2:51271530-51274524   CU928575,CH242-46K5,2:51259004-51289315
(Clone quality: bE46K5 on chr=2; Num_of_Contigs=5; )
LRRC9   ENSSSCG00000005081 1:197709327-197868878    
LRRCC1   ENSSSCG00000006146 4:53372638-53418433    
LRRIQ1   ENSSSCG00000000934 5:91796973-91909904    
LRRIQ3   ENSSSCG00000003784 6:97396743-97441810    
LRRK1   ENSSSCG00000004824 1:147434526-147447712   CU302310,CH242-280D20,1:147348461-147448337
(Clone quality: bE280D20 on chr=1; Num_of_Contigs=3; )
LRRK2   ENSSSCG00000000784 5:67768872-67911260    
LRRN1 ENSSSCG00000007667 3:6832679-6836677   CU928563,CH242-369L8,3:6786261-6837493
(Clone quality: bE369L8 on chr=3; Num_of_Contigs=1; )
LRRN2   ENSSSCG00000015285 9:62867167-62869261    
LRRN3 ENSSSCG00000016652 18:33351495-33353621   CU855628,CH242-131I6,18:33327215-33480434
(Clone quality: bE131I6 on chr=18; Num_of_Contigs=1; )
LRRN3 location ⇒ 18:33352260-33351375   CU855628,CH242-131I6,18:33327215-33480434
(Clone quality: bE131I6 on chr=18; Num_of_Contigs=1; )
LRRN4   ENSSSCG00000007049 17:14038768-14052506   CU311185,CH242-222G18,17:14013109-14072188
(Clone quality: bE222G18 on chr=17; Num_of_Contigs=4; )
LRRN5 ENSSSCG00000015285 9:62867167-62869261    
LRRN5 location ⇒ 9:62868269-62867705   CU930002,CH242-56F21,9:62864577-62868302
(Clone quality: bE56F21 on chr=9; Num_of_Contigs=6; )
LRRN6A ENSSSCG00000001872 7:62892021-62893865   CT954219,CH242-524G5,7:62811732-62908878
(Clone quality: bE524G5 on chr=7; Num_of_Contigs=3; )
LRRN6A location ⇒ 7:62892501-62892014   CT954219,CH242-524G5,7:62811732-62908878
(Clone quality: bE524G5 on chr=7; Num_of_Contigs=3; )
LRRN6C ENSSSCG00000011009 10:37166377-37168212   FP089507,CH242-53P19,10:37131176-37192295
(Clone quality: bE53P19 on chr=10; Num_of_Contigs=2; )
LRRN6C location ⇒ 10:36869522-36869683   CU915408,CH242-307G15,10:36857496-36913491
(Clone quality: bE307G15 on chr=10; Num_of_Contigs=6; )
LRRN6C location ⇒ 10:36998633-36998794   CU550685,CH242-489E23,10:36997521-37006009
(Clone quality: bE489E23 on chr=10; Num_of_Contigs=14; )
LRRN6C location ⇒ 10:37166359-37168525   FP089507,CH242-53P19,10:37131176-37192295
(Clone quality: bE53P19 on chr=10; Num_of_Contigs=2; )
LRRTM2   ENSSSCG00000014341 2:127946359-127947909   CU896693,CH242-394O9,2:127940056-128009776
(Clone quality: bE394O9 on chr=2; Num_of_Contigs=2; )
LRRTM3   ENSSSCG00000010232 14:73310095-73481395    
LRRTM4 ENSSSCG00000008259 3:60921961-60923517   CU928789,CH242-60B14,3:60890861-60931295
(Clone quality: bE60B14 on chr=3; Num_of_Contigs=3; )
LRRTM4 location ⇒ 3:60919459-60919722   CU928789,CH242-60B14,3:60890861-60931295
(Clone quality: bE60B14 on chr=3; Num_of_Contigs=3; )
LRRTM4 location ⇒ 3:60919991-60920144   CU928789,CH242-60B14,3:60890861-60931295
(Clone quality: bE60B14 on chr=3; Num_of_Contigs=3; )
LRRTM4 location ⇒ 3:60921964-60924116   CU928789,CH242-60B14,3:60890861-60931295
(Clone quality: bE60B14 on chr=3; Num_of_Contigs=3; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-45

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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