A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
LTK location ⇒ 1:136276334-136276476   CU633572,CH242-274F1,1:136202998-136286247
(Clone quality: bE274F1 on chr=1; Num_of_Contigs=12; )
LTK location ⇒ 1:136276549-136276855   CU633572,CH242-274F1,1:136202998-136286247
(Clone quality: bE274F1 on chr=1; Num_of_Contigs=12; )
LTV1   ENSSSCG00000004130 1:22434703-22510101    
LU ENSSSCG00000011394 13:27151597-27179339    
LU location ⇒ 6:35757043-35756884   CU459172,CH242-480J10,6:35756411-35818672
(Clone quality: bE480J10 on chr=6; Num_of_Contigs=12; )
LU location ⇒ 6:35757648-35757511   CU459172,CH242-480J10,6:35756411-35818672
(Clone quality: bE480J10 on chr=6; Num_of_Contigs=12; )
LU location ⇒ 6:35758315-35758132   CU459172,CH242-480J10,6:35756411-35818672
(Clone quality: bE480J10 on chr=6; Num_of_Contigs=12; )
LU location ⇒ 6:35958210-35958112   CU459172,CH242-480J10,6:35953989-35960639
(Clone quality: bE480J10 on chr=6; Num_of_Contigs=12; )
LUC7L   ENSSSCG00000007979 3:35265502-35293480    
LUC7L2   ENSSSCG00000016509 18:8471149-8532923    
LUC7L3   ENSSSCG00000017555 12:23813841-23829053   CU929570,CH242-125C23,12:23804637-23864616
(Clone quality: bE125C23 on chr=12; Num_of_Contigs=4; )
LUM ENSSSCG00000015270 9:61794004-61800469   CU657939,CH242-300I14,9:61739657-61895915
(Clone quality: bE300I14 on chr=9; Num_of_Contigs=1; )
LUM ENSSSCG00000000916 5:86804773-86809386   CU467909,CH242-136H19,5:86801901-86816448
(Clone quality: bE136H19 on chr=5; Num_of_Contigs=13; )
LUM location ⇒ 5:86802304-86802374   CU467909,CH242-136H19,5:86801901-86816448
(Clone quality: bE136H19 on chr=5; Num_of_Contigs=13; )
LUM location ⇒ 5:86804750-86805643   CU467909,CH242-136H19,5:86801901-86816448
(Clone quality: bE136H19 on chr=5; Num_of_Contigs=13; )
LUM location ⇒ 5:86808839-86809159   CU467909,CH242-136H19,5:86801901-86816448
(Clone quality: bE136H19 on chr=5; Num_of_Contigs=13; )
LUZP2   ENSSSCG00000013341 2:32963714-33264948    
LUZP4   ENSSSCG00000012596 X:92571975-92578589   CU633284,CH242-371L5,X:92556139-92622275
(Clone quality: bE371L5 on chr=X; Num_of_Contigs=6; )
LY49 ENSSSCG00000000636 5:57977999-57996363   FP017141,CH242-24K3,5:57904188-58023971
(Clone quality: bE24K3 on chr=5; Num_of_Contigs=2; )
LY49 location ⇒ 5:57979518-57979637   FP017141,CH242-24K3,5:57904188-58023971
(Clone quality: bE24K3 on chr=5; Num_of_Contigs=2; )
LY49 location ⇒ 5:57984214-57984415   FP017141,CH242-24K3,5:57904188-58023971
(Clone quality: bE24K3 on chr=5; Num_of_Contigs=2; )
LY49 location ⇒ 5:57987766-57987910   FP017141,CH242-24K3,5:57904188-58023971
(Clone quality: bE24K3 on chr=5; Num_of_Contigs=2; )
LY49 location ⇒ 5:57996116-57996360   FP017141,CH242-24K3,5:57904188-58023971
(Clone quality: bE24K3 on chr=5; Num_of_Contigs=2; )
LY64 location ⇒ 16:43044497-43042267   CU928455,CH242-465J21,16:42987832-43074430
(Clone quality: bE465J21 on chr=16; Num_of_Contigs=3; )
LY64 location ⇒ 16:43048906-43048736   CU928455,CH242-465J21,16:42987832-43074430
(Clone quality: bE465J21 on chr=16; Num_of_Contigs=3; )
LY64 location ⇒ 16:43059049-43058844   CU928455,CH242-465J21,16:42987832-43074430
(Clone quality: bE465J21 on chr=16; Num_of_Contigs=3; )
LY6G5B ENSSSCG00000001415 7:27745941-27748108 CU467793,CH242-60C3,7:27581747-27762222
(Clone quality: bE60C3 on chr=7; Num_of_Contigs=1; ) 		 
LY6G5C ENSSSCG00000001416 7:27750177-27754678 CU467793,CH242-60C3,7:27581747-27762222
(Clone quality: bE60C3 on chr=7; Num_of_Contigs=1; ) 		 
LY6H ENSSSCG00000006961 4:136200699-136203031   FP085504,CH242-211G21,4:136139098-136254946
(Clone quality: bE211G21 on chr=4; Num_of_Contigs=4; )
LY6H location ⇒ 4:136202099-136202312   FP085504,CH242-211G21,4:136139098-136254946
(Clone quality: bE211G21 on chr=4; Num_of_Contigs=4; )
LY6H location ⇒ 4:136202617-136202966   FP085504,CH242-211G21,4:136139098-136254946
(Clone quality: bE211G21 on chr=4; Num_of_Contigs=4; )
LY9 ENSSSCG00000006378 4:93220455-93235041   CU606866,CH242-143J3,4:93072841-93235164
(Clone quality: bE143J3 on chr=4; Num_of_Contigs=1; )
LY9 ENSSSCG00000006375 4:93151439-93178107   CU606866,CH242-143J3,4:93072841-93235164
(Clone quality: bE143J3 on chr=4; Num_of_Contigs=1; )
LY9 location ⇒ 4:93152066-93151493   CU606866,CH242-143J3,4:93072841-93235164
(Clone quality: bE143J3 on chr=4; Num_of_Contigs=1; )
LY9 location ⇒ 4:93168610-93168268   CU606866,CH242-143J3,4:93072841-93235164
(Clone quality: bE143J3 on chr=4; Num_of_Contigs=1; )
LY9 location ⇒ 4:93169407-93169129   CU606866,CH242-143J3,4:93072841-93235164
(Clone quality: bE143J3 on chr=4; Num_of_Contigs=1; )
LY9 location ⇒ 4:93174250-93173926   CU606866,CH242-143J3,4:93072841-93235164
(Clone quality: bE143J3 on chr=4; Num_of_Contigs=1; )
LY96 ENSSSCG00000006175 4:64109793-64133465    
LY96 location ⇒ 4:64109919-64109793   CU210854,CH242-503H17,4:63998832-64109996
(Clone quality: bE503H17 on chr=4; Num_of_Contigs=4; )
LY96 location ⇒ 4:64122297-64122169   CU210930,CH242-386B23,4:64109997-64135396
(Clone quality: bE386B23 on chr=4; Num_of_Contigs=3; )
LY96 location ⇒ 4:64123815-64123724   CU210930,CH242-386B23,4:64109997-64135396
(Clone quality: bE386B23 on chr=4; Num_of_Contigs=3; )
LY96 location ⇒ 4:64133465-64133262   CU210930,CH242-386B23,4:64109997-64135396
(Clone quality: bE386B23 on chr=4; Num_of_Contigs=3; )
LYAR ENSSSCG00000008729 8:4513585-4532066   FP015995,CH242-51I6,8:4474026-4535653
(Clone quality: bE51I6 on chr=8; Num_of_Contigs=6; )
LYAR location ⇒ 8:4531751-4532039   FP015995,CH242-51I6,8:4474026-4535653
(Clone quality: bE51I6 on chr=8; Num_of_Contigs=6; )
LYG2   ENSSSCG00000008184 3:50761175-50764704   FP102935,CH242-65E14,3:50738825-50772444
(Clone quality: bE65E14 on chr=3; Num_of_Contigs=4; )
LYL1 ENSSSCG00000013743 2:56252964-56256843    
LYL1 location ⇒ 2:56253146-56253019   CU463133,CH242-121E19,2:56155200-56253817
(Clone quality: bE121E19 on chr=2; Num_of_Contigs=6; )
LYL1 location ⇒ 2:56255483-56255283   CU463133,CH242-121E19,2:56253918-56264834
(Clone quality: bE121E19 on chr=2; Num_of_Contigs=6; )
LYL1 location ⇒ 2:56256432-56256336   CU463133,CH242-121E19,2:56253918-56264834
(Clone quality: bE121E19 on chr=2; Num_of_Contigs=6; )
LYL1 location ⇒ 2:56256619-56256512   CU463133,CH242-121E19,2:56253918-56264834
(Clone quality: bE121E19 on chr=2; Num_of_Contigs=6; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-45

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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