A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
MMD location ⇒ 12:29259771-29259876   CU914401,CH242-132M18,12:29242356-29307583
(Clone quality: bE132M18 on chr=12; Num_of_Contigs=8; )
MMD location ⇒ 12:29268180-29268859   CU914401,CH242-132M18,12:29242356-29307583
(Clone quality: bE132M18 on chr=12; Num_of_Contigs=8; )
MMD location ⇒ 12:29268906-29269297   CU914401,CH242-132M18,12:29242356-29307583
(Clone quality: bE132M18 on chr=12; Num_of_Contigs=8; )
MMD2   ENSSSCG00000007578 3:3410621-3627142    
MME ENSSSCG00000011723 13:76301389-76398061    
MME location ⇒ 13:76301378-76301548   CU914809,CH242-61A24,13:76297644-76320836
(Clone quality: bE61A24 on chr=13; Num_of_Contigs=4; )
MME location ⇒ 13:76333679-76333844   CU914809,CH242-61A24,13:76320937-76343537
(Clone quality: bE61A24 on chr=13; Num_of_Contigs=4; )
MME location ⇒ 13:76351918-76352055   CU914809,CH242-61A24,13:76343638-76439886
(Clone quality: bE61A24 on chr=13; Num_of_Contigs=4; )
MME location ⇒ 13:76356470-76356608   CU914809,CH242-61A24,13:76343638-76439886
(Clone quality: bE61A24 on chr=13; Num_of_Contigs=4; )
MMEL1   ENSSSCG00000003356 6:43145753-43183292    
MMGT1   ENSSSCG00000012697 X:109284561-109294782   CU856395,CH242-127I21,X:109218984-109313326
(Clone quality: bE127I21 on chr=X; Num_of_Contigs=5; )
MMP1 ENSSSCG00000014985 9:33014658-33048629    
MMP1 location ⇒ 9:33042623-33042456   CU928884,CH242-17P16,9:33037751-33048851
(Clone quality: bE17P16 on chr=9; Num_of_Contigs=10; )
MMP1 location ⇒ 9:33046790-33046632   CU928884,CH242-17P16,9:33037751-33048851
(Clone quality: bE17P16 on chr=9; Num_of_Contigs=10; )
MMP1 location ⇒ 9:33048294-33048144   CU928884,CH242-17P16,9:33037751-33048851
(Clone quality: bE17P16 on chr=9; Num_of_Contigs=10; )
MMP1 location ⇒ 9:33048631-33048384   CU928884,CH242-17P16,9:33037751-33048851
(Clone quality: bE17P16 on chr=9; Num_of_Contigs=10; )
MMP11   ENSSSCG00000010071 14:50922643-50931969   CU468588,CH242-282B12,14:50917167-50969731
(Clone quality: bE282B12 on chr=14; Num_of_Contigs=2; )
MMP12 ENSSSCG00000014987 9:33100422-33110458   CU928884,CH242-17P16,9:33098624-33122451
(Clone quality: bE17P16 on chr=9; Num_of_Contigs=10; )
MMP13   ENSSSCG00000014988 9:33198282-33209282   CU694812,CH242-113G23,9:33185505-33342119
(Clone quality: bE113G23 on chr=9; Num_of_Contigs=1; )
MMP14 ENSSSCG00000002039 7:82408683-82419655   CT737318,CH242-17H24,7:82408265-82613937
(Clone quality: bE17H24 on chr=7; Num_of_Contigs=1; )
MMP15   ENSSSCG00000002806 6:19652019-19671653    
MMP16   ENSSSCG00000006132 4:50225464-50382640    
MMP19 ENSSSCG00000000368 5:20231383-20237342 CU606916,CH242-141C7,5:20096881-20252808
(Clone quality: bE141C7 on chr=5; Num_of_Contigs=1; ) 		 
MMP2 ENSSSCG00000002829 6:20820983-20848466   CU442722,CH242-97L16,6:20726219-20900080
(Clone quality: bE97L16 on chr=6; Num_of_Contigs=1; )
MMP2 location ⇒ 6:20821527-20820983   CU442722,CH242-97L16,6:20726219-20900080
(Clone quality: bE97L16 on chr=6; Num_of_Contigs=1; )
MMP2 location ⇒ 6:20821880-20821586   CU442722,CH242-97L16,6:20726219-20900080
(Clone quality: bE97L16 on chr=6; Num_of_Contigs=1; )
MMP2 location ⇒ 6:20838103-20837928   CU442722,CH242-97L16,6:20726219-20900080
(Clone quality: bE97L16 on chr=6; Num_of_Contigs=1; )
MMP2 location ⇒ 6:20845663-20845435   CU442722,CH242-97L16,6:20726219-20900080
(Clone quality: bE97L16 on chr=6; Num_of_Contigs=1; )
MMP20 ENSSSCG00000014983 9:32893643-32938318   CU972438,CH242-43B10,9:32888949-32950471
(Clone quality: bE43B10 on chr=9; Num_of_Contigs=1; )
MMP20 location ⇒ 9:32893744-32891716   CU972438,CH242-43B10,9:32888949-32950471
(Clone quality: bE43B10 on chr=9; Num_of_Contigs=1; )
MMP20 location ⇒ 9:32924908-32924745   CU972438,CH242-43B10,9:32888949-32950471
(Clone quality: bE43B10 on chr=9; Num_of_Contigs=1; )
MMP20 location ⇒ 9:32933450-32933223   CU972438,CH242-43B10,9:32888949-32950471
(Clone quality: bE43B10 on chr=9; Num_of_Contigs=1; )
MMP20 location ⇒ 9:84543756-84543827   CU927937,CH242-126M11,9:84490508-84554009
(Clone quality: bE126M11 on chr=9; Num_of_Contigs=3; )
MMP23B ENSSSCG00000003351 6:43071451-43073760   FP102593,CH242-171J19,6:43071134-43075299
(Clone quality: bE171J19 on chr=6; Num_of_Contigs=11; )
MMP23B location ⇒ 6:43072241-43072302   FP102593,CH242-171J19,6:43071134-43075299
(Clone quality: bE171J19 on chr=6; Num_of_Contigs=11; )
MMP23B location ⇒ 6:43072376-43072547   FP102593,CH242-171J19,6:43071134-43075299
(Clone quality: bE171J19 on chr=6; Num_of_Contigs=11; )
MMP23B location ⇒ 6:43072913-43073080   FP102593,CH242-171J19,6:43071134-43075299
(Clone quality: bE171J19 on chr=6; Num_of_Contigs=11; )
MMP23B location ⇒ 6:43073156-43073245   FP102593,CH242-171J19,6:43071134-43075299
(Clone quality: bE171J19 on chr=6; Num_of_Contigs=11; )
MMP27   ENSSSCG00000014984 9:32995753-33009058   CU972438,CH242-43B10,9:32968828-33020634
(Clone quality: bE43B10 on chr=9; Num_of_Contigs=1; )
MMP28   ENSSSCG00000017708 12:37542335-37568860   CU914398,CH242-121H9,12:37483147-37597733
(Clone quality: bE121H9 on chr=12; Num_of_Contigs=11; )
MMP3 ENSSSCG00000014986 9:33073736-33080904   CU928884,CH242-17P16,9:33065656-33086912
(Clone quality: bE17P16 on chr=9; Num_of_Contigs=10; )
MMP3 location ⇒ 9:33019791-33019738   CU972438,CH242-43B10,9:32968828-33020634
(Clone quality: bE43B10 on chr=9; Num_of_Contigs=1; )
MMP3 location ⇒ 9:33074120-33073737   CU928884,CH242-17P16,9:33065656-33086912
(Clone quality: bE17P16 on chr=9; Num_of_Contigs=10; )
MMP3 location ⇒ 9:33078281-33078114   CU928884,CH242-17P16,9:33065656-33086912
(Clone quality: bE17P16 on chr=9; Num_of_Contigs=10; )
MMP3 location ⇒ 9:33079962-33079715   CU928884,CH242-17P16,9:33065656-33086912
(Clone quality: bE17P16 on chr=9; Num_of_Contigs=10; )
MMP7 ENSSSCG00000014982 9:32846238-32856790   FP102899,CH242-514C1,9:32842877-32871210
(Clone quality: bE514C1 on chr=9; Num_of_Contigs=2; )
MMP7 location ⇒ 9:32846549-32846242   FP102899,CH242-514C1,9:32842877-32871210
(Clone quality: bE514C1 on chr=9; Num_of_Contigs=2; )
MMP7 location ⇒ 9:32849450-32849289   FP102899,CH242-514C1,9:32842877-32871210
(Clone quality: bE514C1 on chr=9; Num_of_Contigs=2; )
MMP7 location ⇒ 9:32851420-32851289   FP102899,CH242-514C1,9:32842877-32871210
(Clone quality: bE514C1 on chr=9; Num_of_Contigs=2; )
MMP7 location ⇒ 9:32853203-32852740   FP102899,CH242-514C1,9:32842877-32871210
(Clone quality: bE514C1 on chr=9; Num_of_Contigs=2; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-1150, 1151-1200, 1201-1250, 1251-1300, 1301-1350, 1351-1400, 1401-46

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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