A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
Q29049_PIG   ENSSSCG00000000274 5:17219199-17241964   CU928648,CH242-523B11,5:17216902-17258419
(Clone quality: bE523B11 on chr=5; Num_of_Contigs=8; )
Q29049_PIG   ENSSSCG00000000274 5:17219199-17241964   CU928648,CH242-523B11,5:17216902-17258419
(Clone quality: bE523B11 on chr=5; Num_of_Contigs=8; )
Q29059_PIG   ENSSSCG00000017729 12:39813259-39816019   CU928945,CH242-2I24,12:39801812-39863668
(Clone quality: bE2I24 on chr=12; Num_of_Contigs=10; )
Q29060_PIG   ENSSSCG00000000146 5:7899338-7957902    
Q29060_PIG   ENSSSCG00000000145 5:7837926-7894066    
Q29060_PIG   ENSSSCG00000000145 5:7837926-7894066    
Q29060_PIG   ENSSSCG00000000146 5:7899338-7957902    
Q29067_PIG   ENSSSCG00000013870 2:61549837-61617685   CU914416,CH242-266I16,2:61548828-61636433
(Clone quality: bE266I16 on chr=2; Num_of_Contigs=8; )
Q29084_PIG   ENSSSCG00000005137 1:209981631-209983780   CU074336,CH242-81E23,1:209975235-210008902
(Clone quality: bE81E23 on chr=1; Num_of_Contigs=6; )
Q29085_PIG   ENSSSCG00000005143 1:210071399-210071971   CU469469,CH242-142L3,1:210062719-210118069
(Clone quality: bE142L3 on chr=1; Num_of_Contigs=6; )
Q29098_PIG   ENSSSCG00000005141 1:210033874-210034446   CU469469,CH242-142L3,1:210028841-210062618
(Clone quality: bE142L3 on chr=1; Num_of_Contigs=6; )
Q29158_PIG   ENSSSCG00000007174 17:34570654-34575670   CU633588,CH242-437B5,17:34555708-34575692
(Clone quality: bE437B5 on chr=17; Num_of_Contigs=9; )
Q29159_PIG   ENSSSCG00000017616 12:31054426-31054575   FP245413,CH242-143I10,12:31050300-31072631
(Clone quality: bE143I10 on chr=12; Num_of_Contigs=14; )
Q29170_PIG   ENSSSCG00000009165 8:101229430-101252929   FP090890,CH242-268L17,8:101208010-101275247
(Clone quality: bE268L17 on chr=8; Num_of_Contigs=2; )
Q29171_PIG   ENSSSCG00000010820 10:9615090-9615320   CU633420,CH242-481A12,10:9594520-9638107
(Clone quality: bE481A12 on chr=10; Num_of_Contigs=5; )
Q29179_PIG   ENSSSCG00000012880 2:2477815-2535292    
Q29188_PIG   ENSSSCG00000002623 7:135649504-135655701   CU633247,CH242-235D18,7:135648232-135660916
(Clone quality: bE235D18 on chr=7; Num_of_Contigs=14; )
Q29210_PIG   ENSSSCG00000011084 10:50560745-50563751   FP017136,CH242-16H24,10:50558726-50567550
(Clone quality: bE16H24 on chr=10; Num_of_Contigs=9; )
Q29237_PIG   ENSSSCG00000014937 9:25782084-25784771   FP102205,CH242-5N9,9:25732142-25805608
(Clone quality: bE5N9 on chr=9; Num_of_Contigs=4; )
Q29237_PIG   ENSSSCG00000014941 9:26062725-26065432   FP102140,CH242-226D15,9:26058106-26067177
(Clone quality: bE226D15 on chr=9; Num_of_Contigs=12; )
Q29240_PIG   ENSSSCG00000003988 6:122569615-122570025   CU929502,CH242-221H21,6:122558152-122578640
(Clone quality: bE221H21 on chr=6; Num_of_Contigs=5; )
Q29250_PIG   ENSSSCG00000016303 15:126448867-126450052   CU468399,CH242-219F21,15:126429491-126481279
(Clone quality: bE219F21 on chr=15; Num_of_Contigs=4; )
Q29260_PIG   ENSSSCG00000008450 3:89595729-89596058   CU855728,CH242-496H23,3:89580628-89603973
(Clone quality: bE496H23 on chr=3; Num_of_Contigs=3; )
Q29271_PIG   ENSSSCG00000011105 10:54730710-54738929   CU914378,CH242-203J15,10:54729279-54764240
(Clone quality: bE203J15 on chr=10; Num_of_Contigs=5; )
Q29279_PIG   ENSSSCG00000011284 13:21996565-22044219    
Q29283_PIG   ENSSSCG00000005522 1:275389565-275390830   FP102199,CH242-285K13,1:275302391-275395813
(Clone quality: bE285K13 on chr=1; Num_of_Contigs=4; )
Q29310_PIG   ENSSSCG00000007175 17:34612327-34614304   CU633588,CH242-437B5,17:34609931-34618578
(Clone quality: bE437B5 on chr=17; Num_of_Contigs=9; )
Q29346_PIG   ENSSSCG00000005647 1:283412483-283413892   CU234126,CH242-282L14,1:283270038-283452033
(Clone quality: bE282L14 on chr=1; Num_of_Contigs=4; )
Q29347_PIG   ENSSSCG00000017123 16:77276065-77276277   CU856004,CH242-201J12,16:77081054-77276678
(Clone quality: bE201J12 on chr=16; Num_of_Contigs=1; )
Q29349_PIG   ENSSSCG00000002539 7:131891769-131892831   CU633632,CH242-139M12,7:131890126-131894998
(Clone quality: bE139M12 on chr=7; Num_of_Contigs=22; )
Q29365_PIG   ENSSSCG00000012931 2:4101219-4101893   CU928093,CH242-168G1,2:4098471-4105721
(Clone quality: bE168G1 on chr=2; Num_of_Contigs=25; )
Q29376_PIG   ENSSSCG00000008433 3:86801104-86815463   CU855701,CH242-121E3,3:86795777-86833765
(Clone quality: bE121E3 on chr=3; Num_of_Contigs=4; )
Q29389_PIG   ENSSSCG00000000424 5:21457130-21470410   CU633428,CH242-524E23,5:21453640-21535964
(Clone quality: bE524E23 on chr=5; Num_of_Contigs=9; )
Q29389_PIG   ENSSSCG00000000413 5:21247253-21267638    
Q29572_PIG   ENSSSCG00000011653 13:63522614-63526007   CU915369,CH242-521B14,13:63517035-63529507
(Clone quality: bE521B14 on chr=13; Num_of_Contigs=3; )
Q29574_PIG   ENSSSCG00000001174 7:22884112-22884492   CU041316,CH242-47D17,7:22710800-22886089
(Clone quality: bE47D17 on chr=7; Num_of_Contigs=1; )
Q29574_PIG   ENSSSCG00000006673 4:103200855-103201235   CU462833,CH242-167L20,4:103179974-103208836
(Clone quality: bE167L20 on chr=4; Num_of_Contigs=2; )
Q29574_PIG   ENSSSCG00000001145 7:22201705-22202085   CU466447,CH242-214G3,7:22164394-22211337
(Clone quality: bE214G3 on chr=7; Num_of_Contigs=15; )
Q29574_PIG   ENSSSCG00000006674 4:103208181-103208561   CU462833,CH242-167L20,4:103179974-103208836
(Clone quality: bE167L20 on chr=4; Num_of_Contigs=2; )
Q29574_PIG   ENSSSCG00000001134 7:22096010-22096390   CU466447,CH242-214G3,7:22088535-22100885
(Clone quality: bE214G3 on chr=7; Num_of_Contigs=15; )
Q29574_PIG   ENSSSCG00000001170 7:22870952-22871332   CU041316,CH242-47D17,7:22710800-22886089
(Clone quality: bE47D17 on chr=7; Num_of_Contigs=1; )
Q29574_PIG   ENSSSCG00000001139 7:22132773-22133153   CU466447,CH242-214G3,7:22123118-22148770
(Clone quality: bE214G3 on chr=7; Num_of_Contigs=15; )
Q29574_PIG   ENSSSCG00000001140 7:22153359-22153739   CU466447,CH242-214G3,7:22148871-22164293
(Clone quality: bE214G3 on chr=7; Num_of_Contigs=15; )
Q29574_PIG   ENSSSCG00000001123 7:21977161-21977541   CT797471,CH242-54M14,7:21795511-21989531
(Clone quality: bE54M14 on chr=7; Num_of_Contigs=1; )
Q29578_PIG   ENSSSCG00000015140 9:48524870-48534266    
Q29590_PIG   ENSSSCG00000001678 7:44530261-44549136    
Q29590_PIG   ENSSSCG00000001685 7:44829905-44849178   CU928765,CH242-349L1,7:44817320-44863152
(Clone quality: bE349L1 on chr=7; Num_of_Contigs=5; )
Q2EN79_PIG   ENSSSCG00000009983 14:47229725-47232742   CU633725,CH242-61M8,14:47183164-47366877
(Clone quality: bE61M8 on chr=14; Num_of_Contigs=1; )
Q2EN79_PIG   ENSSSCG00000009992 14:47530966-47533981   CU407058,CH242-242C9,14:47495460-47535511
(Clone quality: bE242C9 on chr=14; Num_of_Contigs=6; )
Q2F7Z3_PIG   ENSSSCG00000014334 2:127451831-127452260   CU856219,CH242-295G13,2:127446605-127457336
(Clone quality: bE295G13 on chr=2; Num_of_Contigs=12; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-35

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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