A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
MRPL16   ENSSSCG00000013118 2:9658392-9663129   FP074885,CH242-183I22,2:9614544-9696063
(Clone quality: bE183I22 on chr=2; Num_of_Contigs=1; )
MRPL17   ENSSSCG00000014620 9:2498299-2500179   FP085603,CH242-271A15,9:2493238-2521528
(Clone quality: bE271A15 on chr=9; Num_of_Contigs=10; )
MRPL18   ENSSSCG00000004047 1:8709077-8716658 CU855864,CH242-178J19,1:8688737-8737378
(Clone quality: bE178J19 on chr=1; Num_of_Contigs=11; ) 		 
MRPL2   ENSSSCG00000001658 7:43963153-43967743 CR956433,CH242-96L23,7:43958429-44038128
(No clone quality info on bE96L23) 		 
MRPL20   ENSSSCG00000003347 6:42991477-42993538   FP102593,CH242-171J19,6:42985712-42995594
(Clone quality: bE171J19 on chr=6; Num_of_Contigs=11; )
MRPL21   ENSSSCG00000012879 2:2436853-2448144    
MRPL22   ENSSSCG00000017065 16:65579059-65598814    
MRPL23   ENSSSCG00000011200 13:3654913-3655035   CU469355,CH242-79O19,13:3652921-3655058
(Clone quality: bE79O19 on chr=13; Num_of_Contigs=3; )
MRPL24   ENSSSCG00000006469 4:97045748-97050862   CU582900,CH242-5K23,4:96992487-97070807
(Clone quality: bE5K23 on chr=4; Num_of_Contigs=3; )
MRPL27   ENSSSCG00000017572 12:24316379-24322636   FP102382,CH242-118K7,12:24311213-24335054
(Clone quality: bE118K7 on chr=12; Num_of_Contigs=15; )
MRPL28   ENSSSCG00000007984 3:35434516-35437371   FP103065,CH242-393N23,3:35429454-35444197
(Clone quality: bE393N23 on chr=3; Num_of_Contigs=5; )
MRPL3   ENSSSCG00000011179 13:770198-809421   CU469190,CH242-174L4,13:710806-848839
(Clone quality: bE174L4 on chr=13; Num_of_Contigs=3; )
MRPL30   ENSSSCG00000008183 3:50741024-50748745   FP102935,CH242-65E14,3:50738825-50772444
(Clone quality: bE65E14 on chr=3; Num_of_Contigs=4; )
MRPL32   ENSSSCG00000008846 8:36437986-36438318   FP016165,CH242-16E23,8:36435092-36441677
(Clone quality: bE16E23 on chr=8; Num_of_Contigs=5; )
MRPL35   ENSSSCG00000008224 3:53485449-53498067   FP236635,CH242-106E5,3:53467811-53515853
(Clone quality: bE106E5 on chr=3; Num_of_Contigs=2; )
MRPL36   ENSSSCG00000017113 16:76520257-76833120    
MRPL38   ENSSSCG00000017196 12:3831508-3838602   CU928029,CH242-304M1,12:3750666-3894443
(Clone quality: bE304M1 on chr=12; Num_of_Contigs=9; )
MRPL39   ENSSSCG00000012021 13:135178591-135195977    
MRPL4   ENSSSCG00000013656 2:53227307-53287160    
MRPL43   ENSSSCG00000010560 14:116955164-116956377   CU062549,CH242-28G23,14:116954722-116957067
(Clone quality: bE28G23 on chr=14; Num_of_Contigs=16; )
MRPL44   ENSSSCG00000016232 15:118141763-118148347    
MRPL46   ENSSSCG00000005105 1:200440413-200449719   FP102243,CH242-26G24,1:200383613-200473209
(Clone quality: bE26G24 on chr=1; Num_of_Contigs=3; )
MRPL47   ENSSSCG00000011763 13:89383393-89412215   CU695053,CH242-291G19,13:89374944-89413305
(Clone quality: bE291G19 on chr=13; Num_of_Contigs=6; )
MRPL48   ENSSSCG00000014829 9:7900791-7949238    
MRPL50   ENSSSCG00000005397 1:254751840-254752226   CU469282,CH242-469F7,1:254749708-254759806
(Clone quality: bE469F7 on chr=1; Num_of_Contigs=22; )
MRPL51   ENSSSCG00000011055 10:44960941-44961332   CU929831,CH242-53K15,10:44938882-44976709
(Clone quality: bE53K15 on chr=10; Num_of_Contigs=3; )
MRPL52   ENSSSCG00000002040 7:82421463-82425619   CT737318,CH242-17H24,7:82408265-82613937
(Clone quality: bE17H24 on chr=7; Num_of_Contigs=1; )
MRPS10   ENSSSCG00000001638 7:42945098-42955814   CU468935,CH242-288E9,7:42941423-42957666
(Clone quality: bE288E9 on chr=7; Num_of_Contigs=14; )
MRPS11   ENSSSCG00000005104 1:200428961-200440355   FP102243,CH242-26G24,1:200383613-200473209
(Clone quality: bE26G24 on chr=1; Num_of_Contigs=3; )
MRPS12   ENSSSCG00000002973 6:32958626-32961987   FP236339,CH242-31J9,6:32956103-32971338
(Clone quality: bE31J9 on chr=6; Num_of_Contigs=14; )
MRPS14   ENSSSCG00000015503 9:109959615-109970683   CU856703,CH242-461F11,9:109957487-110007620
(Clone quality: bE461F11 on chr=9; Num_of_Contigs=13; )
MRPS16   ENSSSCG00000010297 14:79333502-79335716   CU639423,CH242-167H24,14:79290725-79348720
(Clone quality: bE167H24 on chr=14; Num_of_Contigs=3; )
MRPS18B ENSSSCG00000001368 7:27020227-27027282 CU326403,CH242-198M20,7:26882096-27123407
(Clone quality: bE198M20 on chr=7; Num_of_Contigs=9; ) 		 
MRPS18B ENSSSCG00000001348 7:26720235-26727290 CU498826,CH242-119D24,7:26553813-26728014
(Clone quality: bE119D24 on chr=7; Num_of_Contigs=31; ) 		 
MRPS18C   ENSSSCG00000009235 8:116137940-116144218   CU468150,CH242-238L14,8:116078870-116150579
(Clone quality: bE238L14 on chr=8; Num_of_Contigs=7; )
MRPS2   ENSSSCG00000005759 1:289867654-289870563   FP102268,CH242-95K10,1:289867363-289878318
(Clone quality: bE95K10 on chr=1; Num_of_Contigs=5; )
MRPS21   ENSSSCG00000002409 7:108943930-108944193   CU633180,CH242-11C4,7:108938892-108983172
(Clone quality: bE11C4 on chr=7; Num_of_Contigs=3; )
MRPS22   ENSSSCG00000011661 13:65314459-65334402    
MRPS24   ENSSSCG00000016724 18:47467638-47470600   FP236704,CH242-239B21,18:47422837-47489456
(Clone quality: bE239B21 on chr=18; Num_of_Contigs=4; )
MRPS25   ENSSSCG00000011597 13:57843871-57844674   CU856531,CH242-250G6,13:57838890-57849127
(Clone quality: bE250G6 on chr=13; Num_of_Contigs=16; )
MRPS26   ENSSSCG00000007165 17:34202466-34204616   CU302217,CH242-196N9,17:34201308-34233423
(Clone quality: bE196N9 on chr=17; Num_of_Contigs=10; )
MRPS28   ENSSSCG00000006158 4:58682863-58778583    
MRPS30   ENSSSCG00000016879 16:26328715-26335408   CU571029,CH242-261F16,16:26323203-26396450
(Clone quality: bE261F16 on chr=16; Num_of_Contigs=4; )
MRPS31   ENSSSCG00000009372 11:15249124-15270857    
MRPS33   ENSSSCG00000013470 2:47525294-47525398   FP089498,CH242-335D20,2:47519578-47531722
(Clone quality: bE335D20 on chr=2; Num_of_Contigs=6; )
MRPS34   ENSSSCG00000008016 3:35924925-35926173   CU929968,CH242-75C10,3:35920214-35934469
(Clone quality: bE75C10 on chr=3; Num_of_Contigs=6; )
MRPS35   ENSSSCG00000000547 5:44550088-44598922   CU062551,CH242-2G17,5:44513004-44648165
(Clone quality: bE2G17 on chr=5; Num_of_Contigs=3; )
MRPS6   ENSSSCG00000012044 13:139489152-139489337   CU914704,CH242-272A10,13:139434585-139495304
(Clone quality: bE272A10 on chr=13; Num_of_Contigs=4; )
MRPS7   ENSSSCG00000017210 12:4233444-4236992 CU928991,CH242-32C19,12:4079494-4242296
(Clone quality: bE32C19 on chr=12; Num_of_Contigs=2; ) 		 
MRS2   ENSSSCG00000001087 7:20251814-20296906   CT737347,CH242-196L6,7:20166720-20328348
(Clone quality: bE196L6 on chr=7; Num_of_Contigs=1; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-1150, 1151-1200, 1201-1250, 1251-1300, 1301-1350, 1351-1400, 1401-46

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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