A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
MUC1 location ⇒ 4:98709687-98709757   CU179666,CH242-242M24,4:98705913-98751478
(Clone quality: bE242M24 on chr=4; Num_of_Contigs=7; )
MUC12 ENSSSCG00000013713 2:55340739-55342862   FP085475,CH242-125H17,2:55326555-55388557
(Clone quality: bE125H17 on chr=2; Num_of_Contigs=11; )
MUC13 ENSSSCG00000011862 13:101834422-101856869    
MUC13 location ⇒ 13:101850791-101850875   FP016126,CH242-101B19,13:101840682-101905531
(Clone quality: bE101B19 on chr=13; Num_of_Contigs=12; )
MUC13 location ⇒ 13:101853561-101853761   FP016126,CH242-101B19,13:101840682-101905531
(Clone quality: bE101B19 on chr=13; Num_of_Contigs=12; )
MUC13 location ⇒ 13:101855921-101856384   FP016126,CH242-101B19,13:101840682-101905531
(Clone quality: bE101B19 on chr=13; Num_of_Contigs=12; )
MUC15 ENSSSCG00000013340 2:31675129-31680088 CU468572,CH242-524G2,2:31513128-31727078
(Clone quality: bE524G2 on chr=2; Num_of_Contigs=6; )
 
MUC15 location ⇒ 1:145297244-145296766   CU326342,CH242-516L10,1:145145961-145300500
(Clone quality: bE516L10 on chr=1; Num_of_Contigs=2; )
MUC16 location ⇒ 2:139655853-139655787   CU929880,CH242-188K23,2:139627747-139761299
(Clone quality: bE188K23 on chr=2; Num_of_Contigs=3; )
MUC16 location ⇒ 2:55392406-55392496   FP085475,CH242-125H17,2:55388658-55393506
(Clone quality: bE125H17 on chr=2; Num_of_Contigs=11; )
MUC16 location ⇒ 2:55396486-55396400   FP085475,CH242-125H17,2:55393607-55407738
(Clone quality: bE125H17 on chr=2; Num_of_Contigs=11; )
MUC16 location ⇒ 2:55424653-55424829   FP085475,CH242-125H17,2:55407839-55429438
(Clone quality: bE125H17 on chr=2; Num_of_Contigs=11; )
MUC17 location ⇒ 7:100814097-100814335   CT956041,CH242-255G15,7:100778435-100877181
(Clone quality: bE255G15 on chr=7; Num_of_Contigs=4; )
MUC17 location ⇒ 7:106818929-106818702   CU640425,CH242-467P21,7:106806930-106859222
(Clone quality: bE467P21 on chr=7; Num_of_Contigs=11; )
MUC17 location ⇒ 7:135832112-135831784   CU062466,CH242-13J19,7:135829206-135875487
(Clone quality: bE13J19 on chr=7; Num_of_Contigs=7; )
MUC17 location ⇒ 7:31785403-31785637 CU407231,CH242-409K21,7:31733670-31902510
(Clone quality: bE409K21 on chr=7; Num_of_Contigs=1; )
 
MUC19   ENSSSCG00000000785 5:67947833-67977247   CU929250,CH242-146G17,5:67945416-67992442
(Clone quality: bE146G17 on chr=5; Num_of_Contigs=11; )
MUC20   ENSSSCG00000011851 13:101064527-101075388 CU468995,CH242-240L11,13:100938456-101151836
(Clone quality: bE240L11 on chr=13; Num_of_Contigs=8; )
 
MUC4 ENSSSCG00000011850 13:101026439-101057563 CU468995,CH242-240L11,13:100938456-101151836
(Clone quality: bE240L11 on chr=13; Num_of_Contigs=8; )
 
MUC4 location ⇒ 13:101043302-101043398 CU468995,CH242-240L11,13:100938456-101151836
(Clone quality: bE240L11 on chr=13; Num_of_Contigs=8; )
 
MUC4 location ⇒ 13:101043777-101044010 CU468995,CH242-240L11,13:100938456-101151836
(Clone quality: bE240L11 on chr=13; Num_of_Contigs=8; )
 
MUC4 location ⇒ 13:101045319-101045456 CU468995,CH242-240L11,13:100938456-101151836
(Clone quality: bE240L11 on chr=13; Num_of_Contigs=8; )
 
MUC4 location ⇒ 13:101047069-101047161 CU468995,CH242-240L11,13:100938456-101151836
(Clone quality: bE240L11 on chr=13; Num_of_Contigs=8; )
 
MUC5AC location ⇒ 13:18909988-18910127   CU464076,CH242-481B9,13:18898351-18944492
(Clone quality: bE481B9 on chr=13; Num_of_Contigs=5; )
MUC5AC location ⇒ 13:18910343-18910426   CU464076,CH242-481B9,13:18898351-18944492
(Clone quality: bE481B9 on chr=13; Num_of_Contigs=5; )
MUC5AC location ⇒ 13:18910694-18910851   CU464076,CH242-481B9,13:18898351-18944492
(Clone quality: bE481B9 on chr=13; Num_of_Contigs=5; )
MUC6 ENSSSCG00000012835 2:35587-37642   CU928976,CH242-144M19,2:35166-43641
(Clone quality: bE144M19 on chr=2; Num_of_Contigs=17; )
MUC6 location ⇒ 2:35702-35587   CU928976,CH242-144M19,2:35166-43641
(Clone quality: bE144M19 on chr=2; Num_of_Contigs=17; )
MUC6 location ⇒ 2:36373-36294   CU928976,CH242-144M19,2:35166-43641
(Clone quality: bE144M19 on chr=2; Num_of_Contigs=17; )
MUC6 location ⇒ 2:36938-36830   CU928976,CH242-144M19,2:35166-43641
(Clone quality: bE144M19 on chr=2; Num_of_Contigs=17; )
MUC6 location ⇒ 2:37231-37043   CU928976,CH242-144M19,2:35166-43641
(Clone quality: bE144M19 on chr=2; Num_of_Contigs=17; )
MUC7 ENSSSCG00000016771 18:53779074-54007747    
MUC8   ENSSSCG00000008658 3:121419246-121565313    
MUCAP_PIG   ENSSSCG00000000787 5:68120974-68149868    
MUCDHL location ⇒ 2:288271-288575   FP015900,CH242-40P17,2:266769-291575
(Clone quality: bE40P17 on chr=2; Num_of_Contigs=6; )
MUCDHL location ⇒ 2:288496-288667   FP015900,CH242-40P17,2:266769-291575
(Clone quality: bE40P17 on chr=2; Num_of_Contigs=6; )
MUDENG   ENSSSCG00000005065 1:195094241-195116968    
MUM1   ENSSSCG00000013426 2:46343964-46358963   CU929580,CH242-161G11,2:46343012-46362233
(Clone quality: bE161G11 on chr=2; Num_of_Contigs=11; )
MUM1L1   ENSSSCG00000012548 X:84793204-84795282   CU928862,CH242-157F22,X:84764982-84854232
(Clone quality: bE157F22 on chr=X; Num_of_Contigs=6; )
MUPCDH   ENSSSCG00000012852 2:282142-290232   FP015900,CH242-40P17,2:266769-291575
(Clone quality: bE40P17 on chr=2; Num_of_Contigs=6; )
MURC   ENSSSCG00000005392 1:253969870-253971759   CU928622,CH242-112O3,1:253962750-253977139
(Clone quality: bE112O3 on chr=1; Num_of_Contigs=5; )
MUS81   ENSSSCG00000012973 2:4865984-4871531    
MUSK ENSSSCG00000005456 1:264626025-264630618   FP089497,CH242-330F21,1:264605986-264635248
(Clone quality: bE330F21 on chr=1; Num_of_Contigs=5; )
MUSK location ⇒ 1:264434689-264434562   CU570709,CH242-149F18,1:264432615-264465811
(Clone quality: bE149F18 on chr=1; Num_of_Contigs=16; )
MUSK location ⇒ 1:264461466-264461324   CU570709,CH242-149F18,1:264432615-264465811
(Clone quality: bE149F18 on chr=1; Num_of_Contigs=16; )
MUSK location ⇒ 1:264463317-264463189   CU570709,CH242-149F18,1:264432615-264465811
(Clone quality: bE149F18 on chr=1; Num_of_Contigs=16; )
MUSK location ⇒ 1:264493910-264493783   CU104685,CH242-24B5,1:264478590-264495743
(Clone quality: bE24B5 on chr=1; Num_of_Contigs=16; )
MUT ENSSSCG00000001732 7:50797609-50818684    
MUT ENSSSCG00000005855 1:294406204-294431198   CU928955,CH242-34I15,1:294396197-294431456
(Clone quality: bE34I15 on chr=1; Num_of_Contigs=4; )
MUT location ⇒ 7:2089632-2089511   CU468611,CH242-522J10,7:2087747-2090735
(Clone quality: bE522J10 on chr=7; Num_of_Contigs=17; )
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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