A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
MUT location ⇒ 7:2364659-2364775   CU607065,CH242-35C2,7:2347388-2372804
(Clone quality: bE35C2 on chr=7; Num_of_Contigs=17; )
MUT location ⇒ 7:4844168-4844047   CT963090,CH242-45O10,7:4762595-4894768
(Clone quality: bE45O10 on chr=7; Num_of_Contigs=2; )
MUT location ⇒ 7:5297466-5297349   CU469451,CH242-442E13,7:5286709-5325719
(Clone quality: bE442E13 on chr=7; Num_of_Contigs=11; )
MUTED   ENSSSCG00000001028 7:5242226-5282891    
MUTED_PIG   ENSSSCG00000001029 7:5388312-5425837    
MUTYH   ENSSSCG00000003919 6:118929207-118937515   CU657926,CH242-123A1,6:118924192-118957983
(Clone quality: bE123A1 on chr=6; Num_of_Contigs=4; )
MVK   ENSSSCG00000009931 14:41563630-41586206   CT737283,CH242-112F16,14:41491728-41660145
(Clone quality: bE112F16 on chr=14; Num_of_Contigs=1; )
MVP location ⇒ 10:157998-157941   CU929008,CH242-207N16,10:137774-191372
(Clone quality: bE207N16 on chr=10; Num_of_Contigs=6; )
MVP location ⇒ 10:3541341-3541410   CU468643,CH242-112A18,10:3516731-3554232
(Clone quality: bE112A18 on chr=10; Num_of_Contigs=2; )
MVP location ⇒ 10:4900580-4900511   CU972502,CH242-499A17,10:4816001-4912352
(Clone quality: bE499A17 on chr=10; Num_of_Contigs=3; )
MVP location ⇒ 10:6112181-6112289   CU571235,CH242-60J8,10:6107012-6218421
(Clone quality: bE60J8 on chr=10; Num_of_Contigs=2; )
MX1 ENSSSCG00000012077 13:144398292-144424140   CU467746,CH242-382J7,13:144371902-144439264
(Clone quality: bE382J7 on chr=13; Num_of_Contigs=7; )
MX1 ENSSSCG00000012081 13:144628863-144641698   CU633498,CH242-236A16,13:144626278-144641905
(Clone quality: bE236A16 on chr=13; Num_of_Contigs=13; )
MX2 ENSSSCG00000012076 13:144354052-144384967    
MX2 location ⇒ 13:144411756-144411956   CU467746,CH242-382J7,13:144371902-144439264
(Clone quality: bE382J7 on chr=13; Num_of_Contigs=7; )
MX2 location ⇒ 13:144420300-144420551   CU467746,CH242-382J7,13:144371902-144439264
(Clone quality: bE382J7 on chr=13; Num_of_Contigs=7; )
MX2 location ⇒ 13:144423472-144423930   CU467746,CH242-382J7,13:144371902-144439264
(Clone quality: bE382J7 on chr=13; Num_of_Contigs=7; )
MX2 location ⇒ 13:144651850-144652308   CU633498,CH242-236A16,13:144649337-144655031
(Clone quality: bE236A16 on chr=13; Num_of_Contigs=13; )
MXD1 ENSSSCG00000008334 3:66565696-66568609   CU928518,CH242-218L8,3:66507509-66569098
(Clone quality: bE218L8 on chr=3; Num_of_Contigs=8; )
MXD1 location ⇒ 3:66561506-66561146   CU928518,CH242-218L8,3:66507509-66569098
(Clone quality: bE218L8 on chr=3; Num_of_Contigs=8; )
MXD1 location ⇒ 3:66562527-66562458   CU928518,CH242-218L8,3:66507509-66569098
(Clone quality: bE218L8 on chr=3; Num_of_Contigs=8; )
MXD1 location ⇒ 3:66563833-66562880   CU928518,CH242-218L8,3:66507509-66569098
(Clone quality: bE218L8 on chr=3; Num_of_Contigs=8; )
MXD1 location ⇒ 3:66564850-66564201   CU928518,CH242-218L8,3:66507509-66569098
(Clone quality: bE218L8 on chr=3; Num_of_Contigs=8; )
MXD3   ENSSSCG00000014041 2:69743109-69747472 CU915382,CH242-167E23,2:69697156-69852996
(Clone quality: bE167E23 on chr=2; Num_of_Contigs=8; ) 		 
MXD4   ENSSSCG00000008687 8:593572-610862    
MXI1 ENSSSCG00000010622 14:126247668-126326369    
MXI1 location ⇒ 14:126320350-126320453   CT737363,CH242-181F23,14:126304259-126433090
(Clone quality: bE181F23 on chr=14; Num_of_Contigs=4; )
MXI1 location ⇒ 14:126321329-126321502   CT737363,CH242-181F23,14:126304259-126433090
(Clone quality: bE181F23 on chr=14; Num_of_Contigs=4; )
MXI1 location ⇒ 14:126324092-126325895   CT737363,CH242-181F23,14:126304259-126433090
(Clone quality: bE181F23 on chr=14; Num_of_Contigs=4; )
MXRA5 ENSSSCG00000012832 X:125485218-125505932   CU928462,CH242-228K3,X:125419534-125507516
(Clone quality: bE228K3 on chr=X; Num_of_Contigs=7; )
MXRA5 location ⇒ X:125486955-125486285   CU928462,CH242-228K3,X:125419534-125507516
(Clone quality: bE228K3 on chr=X; Num_of_Contigs=7; )
MYB   ENSSSCG00000004167 1:30238159-30273903   CU633228,CH242-172B2,1:30233202-30290080
(Clone quality: bE172B2 on chr=1; Num_of_Contigs=5; )
MYBBP1A   ENSSSCG00000017882 12:47737880-47752453   CU929689,CH242-152D18,12:47735315-47770207
(Clone quality: bE152D18 on chr=12; Num_of_Contigs=5; )
MYBL1   ENSSSCG00000006211 4:70726996-70746479    
MYBL2   ENSSSCG00000007366 17:48054856-48077078   CU302397,CH242-82F14,17:48054330-48103577
(Clone quality: bE82F14 on chr=17; Num_of_Contigs=13; )
MYBPC1 ENSSSCG00000000866 5:77934287-78046824    
MYBPC1 location ⇒ 5:77941407-77941274   CU928944,CH242-147F20,5:77921045-77943806
(Clone quality: bE147F20 on chr=5; Num_of_Contigs=9; )
MYBPC1 location ⇒ 5:77942249-77942088   CU928944,CH242-147F20,5:77921045-77943806
(Clone quality: bE147F20 on chr=5; Num_of_Contigs=9; )
MYBPC1 location ⇒ 5:77982322-77982181   CU856405,CH242-261A10,5:77982143-78044228
(Clone quality: bE261A10 on chr=5; Num_of_Contigs=4; )
MYBPC1 location ⇒ 5:77987034-77986837   CU856405,CH242-261A10,5:77982143-78044228
(Clone quality: bE261A10 on chr=5; Num_of_Contigs=4; )
MYBPC2 ENSSSCG00000003218 6:39060914-39071749   FP102476,CH242-133P5,6:39060907-39089695
(Clone quality: bE133P5 on chr=6; Num_of_Contigs=12; )
MYBPC2 location ⇒ 6:39057496-39057665   FP102476,CH242-133P5,6:39056791-39060806
(Clone quality: bE133P5 on chr=6; Num_of_Contigs=12; )
MYBPC2 location ⇒ 6:39058373-39058481   FP102476,CH242-133P5,6:39056791-39060806
(Clone quality: bE133P5 on chr=6; Num_of_Contigs=12; )
MYBPC2 location ⇒ 6:39059098-39059196   FP102476,CH242-133P5,6:39056791-39060806
(Clone quality: bE133P5 on chr=6; Num_of_Contigs=12; )
MYBPC3 ENSSSCG00000013236 2:13212683-13234490    
MYBPC3 location ⇒ 2:13219445-13219308   CU856312,CH242-38I7,2:13202999-13223463
(Clone quality: bE38I7 on chr=2; Num_of_Contigs=10; )
MYBPC3 location ⇒ 2:13224914-13224747   CU856312,CH242-38I7,2:13223564-13257570
(Clone quality: bE38I7 on chr=2; Num_of_Contigs=10; )
MYBPC3 location ⇒ 2:13225443-13225276   CU856312,CH242-38I7,2:13223564-13257570
(Clone quality: bE38I7 on chr=2; Num_of_Contigs=10; )
MYBPC3 location ⇒ 2:13225645-13225537   CU856312,CH242-38I7,2:13223564-13257570
(Clone quality: bE38I7 on chr=2; Num_of_Contigs=10; )
MYBPH ENSSSCG00000016003 15:79582679-79596837    
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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