A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
NCAM ENSSSCG00000007669 3:6850484-6855705   FP102710,CH242-46P3,3:6842494-6864616
(Clone quality: bE46P3 on chr=3; Num_of_Contigs=3; )
NCAM ENSSSCG00000015045 9:39876973-39943731   CU570935,CH242-240E24,9:39843626-40020360
(Clone quality: bE240E24 on chr=9; Num_of_Contigs=2; )
NCAM1 ENSSSCG00000015045 9:39876973-39943731   CU570935,CH242-240E24,9:39843626-40020360
(Clone quality: bE240E24 on chr=9; Num_of_Contigs=2; )
NCAM1 location ⇒ 9:39939748-39939825   CU570935,CH242-240E24,9:39843626-40020360
(Clone quality: bE240E24 on chr=9; Num_of_Contigs=2; )
NCAM1 location ⇒ 9:39943014-39943208   CU570935,CH242-240E24,9:39843626-40020360
(Clone quality: bE240E24 on chr=9; Num_of_Contigs=2; )
NCAM1 location ⇒ 9:39943285-39943787   CU570935,CH242-240E24,9:39843626-40020360
(Clone quality: bE240E24 on chr=9; Num_of_Contigs=2; )
NCAM1 location ⇒ 9:39943852-39944507   CU570935,CH242-240E24,9:39843626-40020360
(Clone quality: bE240E24 on chr=9; Num_of_Contigs=2; )
NCAM2 ENSSSCG00000012020 13:133250612-133325387    
NCAM2 location ⇒ 13:132998291-132998411   CU633688,CH242-267N6,13:132963375-133000086
(Clone quality: bE267N6 on chr=13; Num_of_Contigs=4; )
NCAM2 location ⇒ 13:133250748-133250611   CU928724,CH242-219O15,13:133250543-133270911
(Clone quality: bE219O15 on chr=13; Num_of_Contigs=9; )
NCAM2 location ⇒ 13:133257436-133257293   CU928724,CH242-219O15,13:133250543-133270911
(Clone quality: bE219O15 on chr=13; Num_of_Contigs=9; )
NCAM2 location ⇒ 13:133259543-133259334   CU928724,CH242-219O15,13:133250543-133270911
(Clone quality: bE219O15 on chr=13; Num_of_Contigs=9; )
NCAPD2   ENSSSCG00000000693 5:60035293-60045649    
NCAPG   ENSSSCG00000008747 8:9724158-9765343    
NCAPG2   ENSSSCG00000016405 18:239797-248076   CU928386,CH242-142A15,18:238499-251443
(Clone quality: bE142A15 on chr=18; Num_of_Contigs=5; )
NCAPH   ENSSSCG00000008125 3:41935526-42051841    
NCAPH2   ENSSSCG00000000965 5:99698693-99709406   CU929756,CH242-288F8,5:99690941-99727774
(Clone quality: bE288F8 on chr=5; Num_of_Contigs=8; )
NCBP1   ENSSSCG00000005366 1:250944211-251037664    
NCBP2   ENSSSCG00000011840 13:100433347-100441794   CU862047,CH242-271N21,13:100416497-100453005
(Clone quality: bE271N21 on chr=13; Num_of_Contigs=5; )
NCBP2L   ENSSSCG00000012562 X:86297644-86299123   FP245415,CH242-140M15,X:86286495-86305991
(Clone quality: bE140M15 on chr=X; Num_of_Contigs=5; )
NCF1 location ⇒ 3:9881204-9881280   FP102709,CH242-44F19,3:9876784-9886476
(Clone quality: bE44F19 on chr=3; Num_of_Contigs=7; )
NCF2 ENSSSCG00000015559 9:117106626-117137601   CU570827,CH242-238C10,9:117082384-117181431
(Clone quality: bE238C10 on chr=9; Num_of_Contigs=5; )
NCF2 ENSSSCG00000005853 1:294386840-294395861   CU928955,CH242-34I15,1:294386156-294396096
(Clone quality: bE34I15 on chr=1; Num_of_Contigs=4; )
NCF2 location ⇒ 9:117109594-117109416   CU570827,CH242-238C10,9:117082384-117181431
(Clone quality: bE238C10 on chr=9; Num_of_Contigs=5; )
NCF2 location ⇒ 9:117113080-117112927   CU570827,CH242-238C10,9:117082384-117181431
(Clone quality: bE238C10 on chr=9; Num_of_Contigs=5; )
NCF2 location ⇒ 9:117117131-117116987   CU570827,CH242-238C10,9:117082384-117181431
(Clone quality: bE238C10 on chr=9; Num_of_Contigs=5; )
NCF2 location ⇒ 9:117137588-117137414   CU570827,CH242-238C10,9:117082384-117181431
(Clone quality: bE238C10 on chr=9; Num_of_Contigs=5; )
NCF4 ENSSSCG00000000137 5:7247557-7267206    
NCF4 location ⇒ 5:7247945-7247567   CU407327,CH242-127L5,5:7172124-7252136
(Clone quality: bE127L5 on chr=5; Num_of_Contigs=4; )
NCF4 location ⇒ 5:7249838-7249705   CU407327,CH242-127L5,5:7172124-7252136
(Clone quality: bE127L5 on chr=5; Num_of_Contigs=4; )
NCF4 location ⇒ 5:7261582-7261429   CU407327,CH242-127L5,5:7252237-7317282
(Clone quality: bE127L5 on chr=5; Num_of_Contigs=4; )
NCF4 location ⇒ 5:7267115-7266955   CU407327,CH242-127L5,5:7252237-7317282
(Clone quality: bE127L5 on chr=5; Num_of_Contigs=4; )
NCK1 location ⇒ 1:25321074-25321284   FP086615,CH242-390A6,1:25199336-25364699
(Clone quality: bE390A6 on chr=1; Num_of_Contigs=1; )
NCK1 location ⇒ 1:25433617-25433407   CU550658,CH242-173L18,1:25374242-25486473
(Clone quality: bE173L18 on chr=1; Num_of_Contigs=3; )
NCK2 ENSSSCG00000008144 3:44145878-44155955    
NCKAP1   ENSSSCG00000016019 15:83054583-83155067    
NCKAP1L   ENSSSCG00000000295 5:18228502-18245751   CU457442,CH242-280E10,5:18226973-18246313
(Clone quality: bE280E10 on chr=5; Num_of_Contigs=18; )
NCKAP5   ENSSSCG00000015705 15:17855025-17920112   CU487210,CH242-188C18,15:17811139-17969664
(Clone quality: bE188C18 on chr=15; Num_of_Contigs=3; )
NCKIPSD ENSSSCG00000011364 13:26393833-26400888    
NCKIPSD location ⇒ 13:26394928-26394789   CU861514,CH242-101J13,13:26393493-26400326
(Clone quality: bE101J13 on chr=13; Num_of_Contigs=18; )
NCKIPSD location ⇒ 13:26395103-26395015   CU861514,CH242-101J13,13:26393493-26400326
(Clone quality: bE101J13 on chr=13; Num_of_Contigs=18; )
NCKIPSD location ⇒ 13:26395433-26395261   CU861514,CH242-101J13,13:26393493-26400326
(Clone quality: bE101J13 on chr=13; Num_of_Contigs=18; )
NCKIPSD location ⇒ 13:26396799-26396660   CU861514,CH242-101J13,13:26393493-26400326
(Clone quality: bE101J13 on chr=13; Num_of_Contigs=18; )
NCL ENSSSCG00000016275 15:124482133-124487412   CU856676,CH242-83A8,15:124481402-124487414
(Clone quality: bE83A8 on chr=15; Num_of_Contigs=8; )
NCL ENSSSCG00000004728 1:135190712-135267979    
NCL ENSSSCG00000010182 14:61911963-61952789    
NCL ENSSSCG00000014875 9:11085353-11121685    
NCL location ⇒ 15:124419006-124419082   CU856676,CH242-83A8,15:124418963-124433069
(Clone quality: bE83A8 on chr=15; Num_of_Contigs=8; )
NCL location ⇒ 15:124487052-124487365   CU856676,CH242-83A8,15:124481402-124487414
(Clone quality: bE83A8 on chr=15; Num_of_Contigs=8; )
NCL location ⇒ 15:124488458-124488183   CU856676,CH242-83A8,15:124487515-124506457
(Clone quality: bE83A8 on chr=15; Num_of_Contigs=8; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-29

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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