A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
Q2F7Z3_PIG   ENSSSCG00000014337 2:127558105-127588854    
Q2Q6D6_PIG   ENSSSCG00000000788 5:68462347-68561425    
Q2Q6D7_PIG   ENSSSCG00000000780 5:66962441-66962829   FP236377,CH242-278H20,5:66961791-66965127
(Clone quality: bE278H20 on chr=5; Num_of_Contigs=4; )
Q2VBJ8_PIG   ENSSSCG00000007224 17:37137100-37137321   CU442750,CH242-513N11,17:37124171-37139515
(Clone quality: bE513N11 on chr=17; Num_of_Contigs=4; )
Q2VMZ0_PIG   ENSSSCG00000017716 12:37800703-37800813   CU927946,CH242-204J8,12:37790571-37801096
(Clone quality: bE204J8 on chr=12; Num_of_Contigs=6; )
Q304V8_PIG   ENSSSCG00000005144 1:210087206-210087751   CU469469,CH242-142L3,1:210062719-210118069
(Clone quality: bE142L3 on chr=1; Num_of_Contigs=6; )
Q304W0_PIG   ENSSSCG00000005139 1:210009698-210010243   CU074336,CH242-81E23,1:210009003-210015128
(Clone quality: bE81E23 on chr=1; Num_of_Contigs=6; )
Q304W1_PIG   ENSSSCG00000005154 1:210375874-210376443   CU651597,CH242-112J16,1:210361153-210380225
(Clone quality: bE112J16 on chr=1; Num_of_Contigs=9; )
Q304W4_PIG   ENSSSCG00000005140 1:210028986-210030337   CU469469,CH242-142L3,1:210028841-210062618
(Clone quality: bE142L3 on chr=1; Num_of_Contigs=6; )
Q304W5_PIG   ENSSSCG00000005158 1:210500776-210501345   CU633414,CH242-414D14,1:210407307-210572645
(Clone quality: bE414D14 on chr=1; Num_of_Contigs=1; )
Q3I359_PIG   ENSSSCG00000017408 12:18238457-18239385   CU570902,CH242-109J6,12:18227104-18319905
(Clone quality: bE109J6 on chr=12; Num_of_Contigs=7; )
Q3IA98_PIG   ENSSSCG00000003594 6:60172604-60174101   FP103091,CH242-129P15,6:60171175-60174647
(Clone quality: bE129P15 on chr=6; Num_of_Contigs=20; )
Q3LXB7_PIG   ENSSSCG00000015698 15:15439639-15440627   FP016216,CH242-112L21,15:15391962-15458192
(Clone quality: bE112L21 on chr=15; Num_of_Contigs=7; )
Q401N3_PIG   ENSSSCG00000004619 1:124045311-124135751   CU234162,CH242-199G4,1:124009749-124141738
(Clone quality: bE199G4 on chr=1; Num_of_Contigs=2; )
Q401N3_PIG   ENSSSCG00000004619 1:124045311-124135751   CU234162,CH242-199G4,1:124009749-124141738
(Clone quality: bE199G4 on chr=1; Num_of_Contigs=2; )
Q4LE86_PIG   ENSSSCG00000004620 1:124154196-124240642    
Q4PNS0_PIG   ENSSSCG00000009204 8:111179425-111182489   FP102014,CH242-68K4,8:111174930-111193017
(Clone quality: bE68K4 on chr=8; Num_of_Contigs=5; )
Q4QZ00_PIG   ENSSSCG00000004489 1:97569384-97571718   FP102323,CH242-235J13,1:97569380-97573794
(Clone quality: bE235J13 on chr=1; Num_of_Contigs=2; )
Q4TTV6_PIG   ENSSSCG00000013659 2:53330967-53379189   CU462940,CH242-319N14,2:53308800-53390755
(Clone quality: bE319N14 on chr=2; Num_of_Contigs=3; )
Q4VQ08_PIG   ENSSSCG00000006788 4:113223813-113242013   CU311186,CH242-230C12,4:113204230-113251493
(Clone quality: bE230C12 on chr=4; Num_of_Contigs=3; )
Q4W1H6_PIG   ENSSSCG00000003004 6:33825533-33826256   CU915811,CH242-275M5,6:33822823-33826503
(Clone quality: bE275M5 on chr=6; Num_of_Contigs=27; )
Q4W1H7_PIG   ENSSSCG00000003003 6:33824131-33824310   CU915811,CH242-275M5,6:33822823-33826503
(Clone quality: bE275M5 on chr=6; Num_of_Contigs=27; )
Q4W1H8_PIG   ENSSSCG00000003002 6:33822058-33822222   CU915811,CH242-275M5,6:33810235-33822722
(Clone quality: bE275M5 on chr=6; Num_of_Contigs=27; )
Q4W1H9_PIG   ENSSSCG00000003001 6:33821587-33821766   CU915811,CH242-275M5,6:33810235-33822722
(Clone quality: bE275M5 on chr=6; Num_of_Contigs=27; )
Q4ZJK1_PIG   ENSSSCG00000015352 9:77038761-77039363   CU972383,CH242-147M18,9:77036567-77045078
(Clone quality: bE147M18 on chr=9; Num_of_Contigs=11; )
Q505R2_PIG   ENSSSCG00000003173 6:38112096-38113733   FP102630,CH242-21M22,6:38110433-38119291
(Clone quality: bE21M22 on chr=6; Num_of_Contigs=8; )
Q505R2_PIG   ENSSSCG00000003163 6:37945517-37947154   FP102665,CH242-289C15,6:37922726-37953464
(Clone quality: bE289C15 on chr=6; Num_of_Contigs=6; )
Q50HU4_PIG   ENSSSCG00000006180 4:64619622-64619705   CU462961,CH242-392K9,4:64592162-64643353
(Clone quality: bE392K9 on chr=4; Num_of_Contigs=7; )
Q50HU4_PIG   ENSSSCG00000006178 4:64390876-64390959   CU693411,CH242-270F22,4:64380343-64394784
(Clone quality: bE270F22 on chr=4; Num_of_Contigs=13; )
Q52NJ5_PIG   ENSSSCG00000000870 5:78335732-78349893   CU633565,CH242-24K9,5:78303208-78434634
(Clone quality: bE24K9 on chr=5; Num_of_Contigs=4; )
Q56P29_PIG   ENSSSCG00000001217 7:24061319-24062527 CU313307,CH242-264E8,7:23910600-24118818
(Clone quality: bE264E8 on chr=7; Num_of_Contigs=4; ) 		 
Q59HI5_PIG   ENSSSCG00000008781 8:25685648-25695941   CU694791,CH242-295G5,8:25655285-25835574
(Clone quality: bE295G5 on chr=8; Num_of_Contigs=1; )
Q59HI5_PIG   ENSSSCG00000008779 8:25596714-25606824    
Q59HI6_PIG   ENSSSCG00000008784 8:25722740-25741739   CU694791,CH242-295G5,8:25655285-25835574
(Clone quality: bE295G5 on chr=8; Num_of_Contigs=1; )
Q59HI6_PIG   ENSSSCG00000008776 8:25550915-25569915   FP089508,CH242-63B6,8:25543927-25603877
(Clone quality: bE63B6 on chr=8; Num_of_Contigs=4; )
Q59HI9_PIG   ENSSSCG00000008782 8:25708709-25716544   CU694791,CH242-295G5,8:25655285-25835574
(Clone quality: bE295G5 on chr=8; Num_of_Contigs=1; )
Q59HI9_PIG   ENSSSCG00000008777 8:25576111-25583946   FP089508,CH242-63B6,8:25543927-25603877
(Clone quality: bE63B6 on chr=8; Num_of_Contigs=4; )
Q5GFD7_PIG   ENSSSCG00000003713 6:74721446-74758371    
Q5MCI8_PIG   ENSSSCG00000002966 6:32815513-32815903   FP245504,CH242-1N8,6:32814968-32819365
(Clone quality: bE1N8 on chr=6; Num_of_Contigs=9; )
Q5MIZ9_PIG   ENSSSCG00000015390 9:86687844-86941353    
Q5PXK3_PIG   ENSSSCG00000004643 1:126620609-126669738    
Q5RLQ9_PIG   ENSSSCG00000015990 15:78170115-78170210   CU914511,CH242-315O20,15:78170080-78178318
(Clone quality: bE315O20 on chr=15; Num_of_Contigs=7; )
Q5Y2C6_PIG   ENSSSCG00000007310 17:41249696-41333037    
Q66WL4_PIG   ENSSSCG00000002866 6:28811238-28812302   CU929902,CH242-260F18,6:28809182-28963405
(Clone quality: bE260F18 on chr=6; Num_of_Contigs=2; )
Q68IQ5_PIG   ENSSSCG00000005159 1:210513738-210514307   CU633414,CH242-414D14,1:210407307-210572645
(Clone quality: bE414D14 on chr=1; Num_of_Contigs=1; )
Q68RU1_PIG   ENSSSCG00000000398 5:20748241-20749523   CU655980,CH242-195E17,5:20728687-20784383
(Clone quality: bE195E17 on chr=5; Num_of_Contigs=4; )
Q6B339_PIG   ENSSSCG00000015784 15:42918315-42985195    
Q6BBQ1_PIG   ENSSSCG00000012300 X:42804749-42807246   FP067430,CH242-266D21,X:42803496-42842032
(Clone quality: bE266D21 on chr=X; Num_of_Contigs=12; )
Q6BBQ1_PIG   ENSSSCG00000012300 X:42804749-42807246   FP067430,CH242-266D21,X:42803496-42842032
(Clone quality: bE266D21 on chr=X; Num_of_Contigs=12; )
Q6DKZ9_PIG   ENSSSCG00000007054 17:15079561-15080376   CU457416,CH242-512I13,17:15078199-15081959
(Clone quality: bE512I13 on chr=17; Num_of_Contigs=7; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-35

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

© 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team