A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
BAMBI ENSSSCG00000011014 10:38182802-38188343   CU570822,CH242-194F17,10:38182328-38219225
(Clone quality: bE194F17 on chr=10; Num_of_Contigs=3; )
BANF1   ENSSSCG00000012961 2:4706155-4708016   CU694743,CH242-58A13,2:4689745-4721432
(Clone quality: bE58A13 on chr=2; Num_of_Contigs=2; )
BANF2   ENSSSCG00000007087 17:26761654-26806456    
BANK1 location ⇒ 8:102084717-102084933   FP015975,CH242-47G16,8:102074561-102149572
(Clone quality: bE47G16 on chr=8; Num_of_Contigs=2; )
BANK1 location ⇒ 8:102128539-102128695   FP015975,CH242-47G16,8:102074561-102149572
(Clone quality: bE47G16 on chr=8; Num_of_Contigs=2; )
BANK1 location ⇒ 8:102137711-102137851   FP015975,CH242-47G16,8:102074561-102149572
(Clone quality: bE47G16 on chr=8; Num_of_Contigs=2; )
BANK1 location ⇒ 8:102144184-102144325   FP015975,CH242-47G16,8:102074561-102149572
(Clone quality: bE47G16 on chr=8; Num_of_Contigs=2; )
BAP1   ENSSSCG00000011438 13:29159707-29167575   CU550676,CH242-330J9,13:29135788-29268883
(Clone quality: bE330J9 on chr=13; Num_of_Contigs=4; )
BARD1 ENSSSCG00000016170 15:110185523-110268008    
BARD1 location ⇒ 15:110042998-110043307   CU467107,CH242-77I8,15:110039899-110043760
(Clone quality: bE77I8 on chr=15; Num_of_Contigs=6; )
BARD1 location ⇒ 15:110227326-110227153   CU856276,CH242-150B11,15:110209701-110235034
(Clone quality: bE150B11 on chr=15; Num_of_Contigs=3; )
BARD1 location ⇒ 15:110229333-110229251   CU856276,CH242-150B11,15:110209701-110235034
(Clone quality: bE150B11 on chr=15; Num_of_Contigs=3; )
BARD1 location ⇒ 15:110235592-110235424   CU856276,CH242-150B11,15:110235135-110337724
(Clone quality: bE150B11 on chr=15; Num_of_Contigs=3; )
BARHL1   ENSSSCG00000005730 1:288108201-288115592    
BARHL2   ENSSSCG00000006914 4:130224667-130229439    
BARX1 ENSSSCG00000008081 3:38364296-38367788   FP102259,CH242-507E20,3:38318964-38457094
(Clone quality: bE507E20 on chr=3; Num_of_Contigs=3; )
BARX2 ENSSSCG00000015239 9:54715975-54794412    
BARX2 location ⇒ 9:54794949-54794578   CU856388,CH242-201L15,9:54759902-54806638
(Clone quality: bE201L15 on chr=9; Num_of_Contigs=10; )
BASP1 ENSSSCG00000016795 16:6089147-6089833   CU927900,CH242-257O21,16:6085621-6101815
(Clone quality: bE257O21 on chr=16; Num_of_Contigs=32; )
BASP1 location ⇒ 16:5911622-5911786   CU914365,CH242-262O19,16:5895026-5922472
(Clone quality: bE262O19 on chr=16; Num_of_Contigs=4; )
BASP1 location ⇒ 16:6089137-6089850   CU927900,CH242-257O21,16:6085621-6101815
(Clone quality: bE257O21 on chr=16; Num_of_Contigs=32; )
BASP1 location ⇒ 16:6089939-6090192   CU927900,CH242-257O21,16:6085621-6101815
(Clone quality: bE257O21 on chr=16; Num_of_Contigs=32; )
BASP1 location ⇒ 16:6090329-6090538   CU927900,CH242-257O21,16:6085621-6101815
(Clone quality: bE257O21 on chr=16; Num_of_Contigs=32; )
BAT1 ENSSSCG00000001400 7:27616916-27627904 CU467793,CH242-60C3,7:27581747-27762222
(Clone quality: bE60C3 on chr=7; Num_of_Contigs=1; ) 		 
BAT2 ENSSSCG00000015478 9:106975482-107010098    
BAT2 ENSSSCG00000005715 1:286805591-286809925    
BAT2 ENSSSCG00000001409 7:27701255-27714990 CU467793,CH242-60C3,7:27581747-27762222
(Clone quality: bE60C3 on chr=7; Num_of_Contigs=1; ) 		 
BAT2L   ENSSSCG00000005715 1:286805591-286809925    
BAT3 ENSSSCG00000001410 7:27715820-27728074 CU467793,CH242-60C3,7:27581747-27762222
(Clone quality: bE60C3 on chr=7; Num_of_Contigs=1; ) 		 
BAT4 ENSSSCG00000001413 7:27736062-27739689 CU467793,CH242-60C3,7:27581747-27762222
(Clone quality: bE60C3 on chr=7; Num_of_Contigs=1; ) 		 
BAT5 ENSSSCG00000001417 7:27759878-27762008 CU467793,CH242-60C3,7:27581747-27762222
(Clone quality: bE60C3 on chr=7; Num_of_Contigs=1; ) 		 
BATF3 ENSSSCG00000015594 9:123167317-123179945   CU657946,CH242-238G6,9:123128262-123180984
(Clone quality: bE238G6 on chr=9; Num_of_Contigs=3; )
BATF3 location ⇒ 9:123167518-123167601   CU657946,CH242-238G6,9:123128262-123180984
(Clone quality: bE238G6 on chr=9; Num_of_Contigs=3; )
BATF3 location ⇒ 9:123170543-123170651   CU657946,CH242-238G6,9:123128262-123180984
(Clone quality: bE238G6 on chr=9; Num_of_Contigs=3; )
BATF3 location ⇒ 9:123179435-123179625   CU657946,CH242-238G6,9:123128262-123180984
(Clone quality: bE238G6 on chr=9; Num_of_Contigs=3; )
BATF3 location ⇒ 9:123305686-123305578   CU928715,CH242-114L21,9:123296729-123315517
(Clone quality: bE114L21 on chr=9; Num_of_Contigs=13; )
BAX ENSSSCG00000016186 15:113484201-113562604    
BAX ENSSSCG00000000473 5:30371879-30457804    
BAX ENSSSCG00000003144 6:37658441-37866195    
BAX ENSSSCG00000006930 4:134256175-134280292 CU695038,CH242-252F2,4:134247814-134289275
(Clone quality: bE252F2 on chr=13; Num_of_Contigs=4; ) 		 
BAX ENSSSCG00000000206 5:14411877-14437905    
BAX ENSSSCG00000010345 14:88720505-88735626   CU633218,CH242-144B15,14:88679736-88865867
(Clone quality: bE144B15 on chr=14; Num_of_Contigs=2; )
BAX location ⇒ 6:37797432-37797325   FP102974,CH242-517N5,6:37795399-37797735
(Clone quality: bE517N5 on chr=6; Num_of_Contigs=15; )
BAX location ⇒ 6:37864816-37864678   FP102974,CH242-517N5,6:37863212-37865786
(Clone quality: bE517N5 on chr=6; Num_of_Contigs=15; )
BAX location ⇒ 6:37865315-37865167   FP102974,CH242-517N5,6:37863212-37865786
(Clone quality: bE517N5 on chr=6; Num_of_Contigs=15; )
BAX location ⇒ 6:37865458-37865406   FP102974,CH242-517N5,6:37863212-37865786
(Clone quality: bE517N5 on chr=6; Num_of_Contigs=15; )
BAXA location ⇒ 6:37796879-37796775   FP102974,CH242-517N5,6:37795399-37797735
(Clone quality: bE517N5 on chr=6; Num_of_Contigs=15; )
BAXA location ⇒ 6:37797432-37797325   FP102974,CH242-517N5,6:37795399-37797735
(Clone quality: bE517N5 on chr=6; Num_of_Contigs=15; )
BAXA location ⇒ 6:37864816-37864678   FP102974,CH242-517N5,6:37863212-37865786
(Clone quality: bE517N5 on chr=6; Num_of_Contigs=15; )
BAXA location ⇒ 6:37865313-37865167   FP102974,CH242-517N5,6:37863212-37865786
(Clone quality: bE517N5 on chr=6; Num_of_Contigs=15; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-28

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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