A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
NCL location ⇒ 15:124489811-124489757   CU856676,CH242-83A8,15:124487515-124506457
(Clone quality: bE83A8 on chr=15; Num_of_Contigs=8; )
NCLN   ENSSSCG00000013475 2:47755621-47771353   FP016150,CH242-470H23,2:47737511-47776868
(Clone quality: bE470H23 on chr=2; Num_of_Contigs=9; )
NCOA1   ENSSSCG00000008581 3:106223716-106336658    
NCOA2 ENSSSCG00000006194 4:67323856-67420186    
NCOA4 ENSSSCG00000010399 14:94478631-94503224    
NCOA4 location ⇒ 14:94479674-94479531   CU607060,CH242-161K20,14:94357070-94491956
(Clone quality: bE161K20 on chr=14; Num_of_Contigs=18; )
NCOA4 location ⇒ 14:94481168-94480169   CU607060,CH242-161K20,14:94357070-94491956
(Clone quality: bE161K20 on chr=14; Num_of_Contigs=18; )
NCOA4 location ⇒ 14:94482975-94482827   CU607060,CH242-161K20,14:94357070-94491956
(Clone quality: bE161K20 on chr=14; Num_of_Contigs=18; )
NCOA4 location ⇒ 14:94487543-94487385   CU607060,CH242-161K20,14:94357070-94491956
(Clone quality: bE161K20 on chr=14; Num_of_Contigs=18; )
NCOA5   ENSSSCG00000007438 17:50291853-50310327   CU407252,CH242-441N18,17:50277800-50317745
(Clone quality: bE441N18 on chr=17; Num_of_Contigs=7; )
NCOA6 ENSSSCG00000007284 17:40180021-40233330    
NCOA7   ENSSSCG00000004222 1:38631028-38776971    
NCOR1 ENSSSCG00000018037 12:56360417-56488821    
NCOR1 location ⇒ 12:56393972-56393890   CU467081,CH242-221I17,12:56389517-56400382
(Clone quality: bE221I17 on chr=12; Num_of_Contigs=15; )
NCOR1 location ⇒ 12:56395559-56395377   CU467081,CH242-221I17,12:56389517-56400382
(Clone quality: bE221I17 on chr=12; Num_of_Contigs=15; )
NCOR1 location ⇒ 12:56397593-56397368   CU467081,CH242-221I17,12:56389517-56400382
(Clone quality: bE221I17 on chr=12; Num_of_Contigs=15; )
NCOR1 location ⇒ 12:56400718-56400661   CU467081,CH242-221I17,12:56400483-56402908
(Clone quality: bE221I17 on chr=12; Num_of_Contigs=15; )
NCOR2 ENSSSCG00000009761 14:28690014-28917234    
NCOR2 location ⇒ 14:28872911-28873287   CT737269,CH242-39H19,14:28857968-28938515
(Clone quality: bE39H19 on chr=14; Num_of_Contigs=4; )
NCOR2 location ⇒ 14:28897951-28898252   CT737269,CH242-39H19,14:28857968-28938515
(Clone quality: bE39H19 on chr=14; Num_of_Contigs=4; )
NCOR2 location ⇒ 14:28900004-28900353   CT737269,CH242-39H19,14:28857968-28938515
(Clone quality: bE39H19 on chr=14; Num_of_Contigs=4; )
NCOR2 location ⇒ 14:28916177-28917234   CT737269,CH242-39H19,14:28857968-28938515
(Clone quality: bE39H19 on chr=14; Num_of_Contigs=4; )
NCR1 location ⇒ 6:40937000-40936948 CR853303,PigE-173F2,6:40799672-40950930
(No clone quality info on bT173F2) 		 
NCR1 location ⇒ 6:40940347-40940062 CR853303,PigE-173F2,6:40799672-40950930
(No clone quality info on bT173F2) 		 
NCR1 location ⇒ 6:41168475-41168760   FP102421,CH242-120N16,6:41167356-41195579
(Clone quality: bE120N16 on chr=6; Num_of_Contigs=6; )
NCR1 location ⇒ 6:41171254-41171536   FP102421,CH242-120N16,6:41167356-41195579
(Clone quality: bE120N16 on chr=6; Num_of_Contigs=6; )
NCR2 ENSSSCG00000001618 7:42015385-42021278   CU306815,CH242-32N5,7:41973045-42041868
(Clone quality: bE32N5 on chr=7; Num_of_Contigs=10; )
NCR3 ENSSSCG00000001407 7:27672113-27674934 CU467793,CH242-60C3,7:27581747-27762222
(Clone quality: bE60C3 on chr=7; Num_of_Contigs=1; ) 		 
NCRNA00085   ENSSSCG00000003237 6:39534122-39534295   CU019573,CH242-21M5,6:39525419-39545846
(Clone quality: bE21M5 on chr=6; Num_of_Contigs=9; )
NCRNA00153 ENSSSCG00000007108 17:30134048-30135350   CU459108,CH242-277K1,17:30124939-30186999
(Clone quality: bE277K1 on chr=17; Num_of_Contigs=2; )
NCRNA00153 location ⇒ 17:30135331-30134745   CU459108,CH242-277K1,17:30124939-30186999
(Clone quality: bE277K1 on chr=17; Num_of_Contigs=2; )
NCRNA00153 location ⇒ 17:30165999-30165860   CU459108,CH242-277K1,17:30124939-30186999
(Clone quality: bE277K1 on chr=17; Num_of_Contigs=2; )
NCRNA00153 location ⇒ 17:30169661-30169595   CU459108,CH242-277K1,17:30124939-30186999
(Clone quality: bE277K1 on chr=17; Num_of_Contigs=2; )
NCRNA00153 location ⇒ 17:30214604-30214657   CU459108,CH242-277K1,17:30204941-30217313
(Clone quality: bE277K1 on chr=17; Num_of_Contigs=2; )
NCSTN   ENSSSCG00000006385 4:93569267-93590614 CU207285,CH242-406N12,4:93542791-93708820
(Clone quality: bE406N12 on chr=4; Num_of_Contigs=3; ) 		 
NCUBE1   ENSSSCG00000004320 1:60250503-60266665   CU929853,CH242-88I23,1:60235795-60273026
(Clone quality: bE88I23 on chr=1; Num_of_Contigs=7; )
NDC80   ENSSSCG00000003697 6:71187029-71220819   CU929712,CH242-197D22,6:71174256-71220834
(Clone quality: bE197D22 on chr=6; Num_of_Contigs=11; )
NDEL1   ENSSSCG00000017986 12:50661213-50699341    
NDFIP1   ENSSSCG00000014392 2:130303436-130336718   FP102264,CH242-59H11,2:130302824-130337206
(Clone quality: bE59H11 on chr=2; Num_of_Contigs=3; )
NDNL2   ENSSSCG00000004852 1:152309142-152309978   FP016134,CH242-155H5,1:152308557-152310556
(Clone quality: bE155H5 on chr=1; Num_of_Contigs=8; )
NDOR1   ENSSSCG00000005859 1:294443792-294451310   CU928955,CH242-34I15,1:294431557-294452171
(Clone quality: bE34I15 on chr=1; Num_of_Contigs=4; )
NDP ENSSSCG00000011347 13:25946354-25951160   FP102065,CH242-145E9,13:25944867-25960134
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
NDP ENSSSCG00000008017 3:35926495-35927730   CU929968,CH242-75C10,3:35920214-35934469
(Clone quality: bE75C10 on chr=3; Num_of_Contigs=6; )
NDP ENSSSCG00000017591 12:25059937-25089119    
NDRG1 ENSSSCG00000005944 4:6827942-6863423   CU179695,CH242-327C11,4:6815470-6863959
(Clone quality: bE327C11 on chr=4; Num_of_Contigs=5; )
NDRG3 ENSSSCG00000007322 17:42191967-42231689    
NDRG3 location ⇒ 16:16764576-16765789   CU927898,CH242-220O22,16:16762316-16769305
(Clone quality: bE220O22 on chr=16; Num_of_Contigs=25; )
NDRG3 location ⇒ 16:16981687-16980474   FP085401,CH242-267F2,16:16970206-17030766
(Clone quality: bE267F2 on chr=16; Num_of_Contigs=5; )
NDRG4 ENSSSCG00000002801 6:19334216-19342640   FP236673,CH242-274G15,6:19307220-19353552
(Clone quality: bE274G15 on chr=6; Num_of_Contigs=4; )
NDRG4 location ⇒ 6:19334610-19334530   FP236673,CH242-274G15,6:19307220-19353552
(Clone quality: bE274G15 on chr=6; Num_of_Contigs=4; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-29

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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