A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
BAZ1A   ENSSSCG00000001957 7:70761014-70815968   CT842119,CH242-155B15,7:70744317-70879008
(Clone quality: bE155B15 on chr=7; Num_of_Contigs=2; )
BAZ1B   ENSSSCG00000007711 3:9255156-9273448   CU655977,CH242-166N19,3:9254762-9275663
(Clone quality: bE166N19 on chr=3; Num_of_Contigs=8; )
BAZ2A   ENSSSCG00000000403 5:20955320-21039714    
BAZ2B   ENSSSCG00000015882 15:61689004-61725353    
BBC3 location ⇒ 6:36777370-36776500   FP102474,CH242-104M2,6:36670130-36777370
(Clone quality: bE104M2 on chr=6; Num_of_Contigs=1; )
BBC3 location ⇒ 6:36780201-36780010   FP102474,CH242-104M2,6:36777471-36797458
(Clone quality: bE104M2 on chr=6; Num_of_Contigs=1; )
BBC3 location ⇒ 6:36849423-36848523   FP102420,CH242-118A10,6:36848090-36853984
(Clone quality: bE118A10 on chr=6; Num_of_Contigs=13; )
BBC3 location ⇒ 6:36852320-36852129   FP102420,CH242-118A10,6:36848090-36853984
(Clone quality: bE118A10 on chr=6; Num_of_Contigs=13; )
BBOX1   ENSSSCG00000013337 2:31263957-31302007    
BBS10   ENSSSCG00000000523 5:39524222-39525907   CU856693,CH242-216K21,5:39524170-39537364
(Clone quality: bE216K21 on chr=5; Num_of_Contigs=22; )
BBS2 ENSSSCG00000009093 8:87734737-87775458    
BBS4   ENSSSCG00000001924 7:66029932-66087109    
BBS5   ENSSSCG00000015931 15:71287750-71308948   CU467932,CH242-472J8,15:71283764-71312303
(Clone quality: bE472J8 on chr=15; Num_of_Contigs=8; )
BBS7   ENSSSCG00000009093 8:87734737-87775458    
BBS9   ENSSSCG00000016667 18:39107251-39417923    
BBX   ENSSSCG00000011943 13:112675597-112716407    
BCAM location ⇒ 6:35759044-35758973   CU459172,CH242-480J10,6:35756411-35818672
(Clone quality: bE480J10 on chr=6; Num_of_Contigs=12; )
BCAM location ⇒ 6:35956038-35955932   CU459172,CH242-480J10,6:35953989-35960639
(Clone quality: bE480J10 on chr=6; Num_of_Contigs=12; )
BCAM location ⇒ 6:35957647-35957543   CU459172,CH242-480J10,6:35953989-35960639
(Clone quality: bE480J10 on chr=6; Num_of_Contigs=12; )
BCAM location ⇒ 6:35958208-35958094   CU459172,CH242-480J10,6:35953989-35960639
(Clone quality: bE480J10 on chr=6; Num_of_Contigs=12; )
BCAN ENSSSCG00000006477 4:97238167-97252128    
BCAN location ⇒ 4:97244763-97245282   FP102690,CH242-379E5,4:97231210-97247202
(Clone quality: bE379E5 on chr=4; Num_of_Contigs=15; )
BCAN location ⇒ 4:97248797-97248908   FP102690,CH242-379E5,4:97247303-97256739
(Clone quality: bE379E5 on chr=4; Num_of_Contigs=15; )
BCAP31 ENSSSCG00000012772 X:122482060-122598233    
BCAP31 location ⇒ X:122482409-122482064   FP245398,CH242-390A7,X:122474466-122509200
(Clone quality: bE390A7 on chr=X; Num_of_Contigs=13; )
BCAP31 location ⇒ X:122485289-122485153   FP245398,CH242-390A7,X:122474466-122509200
(Clone quality: bE390A7 on chr=X; Num_of_Contigs=13; )
BCAP31 location ⇒ X:122502548-122502400   FP245398,CH242-390A7,X:122474466-122509200
(Clone quality: bE390A7 on chr=X; Num_of_Contigs=13; )
BCAP31 location ⇒ X:122508837-122508701   FP245398,CH242-390A7,X:122474466-122509200
(Clone quality: bE390A7 on chr=X; Num_of_Contigs=13; )
BCAR1 location ⇒ 7:8176286-8176208   CT998542,CH242-393O5,7:8171516-8370198
(Clone quality: bE393O5 on chr=7; Num_of_Contigs=2; )
BCAR1 location ⇒ 7:8181036-8181001   CT998542,CH242-393O5,7:8171516-8370198
(Clone quality: bE393O5 on chr=7; Num_of_Contigs=2; )
BCAR1 location ⇒ 7:82087691-82087639   CU633625,CH242-116C14,7:82041923-82116183
(Clone quality: bE116C14 on chr=7; Num_of_Contigs=8; )
BCAR1 location ⇒ 7:82219135-82219187   CU467584,CH242-430E12,7:82202532-82223278
(Clone quality: bE430E12 on chr=7; Num_of_Contigs=18; )
BCAR3   ENSSSCG00000006893 4:127967653-127995417   CU469025,CH242-391D20,4:127964296-128108482
(Clone quality: bE391D20 on chr=4; Num_of_Contigs=2; )
BCAS1   ENSSSCG00000007485 17:57149919-57257516    
BCAS3   ENSSSCG00000017676 12:35277764-35322510   CU928993,CH242-34K3,12:35252633-35335024
(Clone quality: bE34K3 on chr=12; Num_of_Contigs=5; )
BCAS4   ENSSSCG00000007472 17:54433712-54498574 CT009560,CH242-4C12,17:54397384-54561501
(No clone quality info on bE4C12) 		 
BCAT2   ENSSSCG00000003139 6:37587860-37602581    
BCCIP   ENSSSCG00000010743 14:142126292-142138279   CT841550,CH242-252A14,14:142117451-142165612
(Clone quality: bE252A14 on chr=14; Num_of_Contigs=5; )
BCDIN3D   ENSSSCG00000000208 5:14459017-14464017   CU633424,CH242-4O24,5:14435312-14464184
(Clone quality: bE4O24 on chr=5; Num_of_Contigs=4; )
BCKDHA   ENSSSCG00000003007 6:33924716-33941280   FP236582,CH242-238L13,6:33921264-33956509
(Clone quality: bE238L13 on chr=6; Num_of_Contigs=11; )
BCKDHB   ENSSSCG00000004465 1:90700531-90883528    
BCKDK   ENSSSCG00000007763 3:15880441-15885737   CU464163,CH242-418M3,3:15802333-15893853
(Clone quality: bE418M3 on chr=3; Num_of_Contigs=3; )
BCL10 ENSSSCG00000006946 4:135683249-135691625   CU595636,CH242-517I9,4:135636068-135693254
(Clone quality: bE517I9 on chr=4; Num_of_Contigs=3; )
BCL10 ENSSSCG00000006943 4:135607506-135615883   CU179752,CH242-138E14,4:135457241-135636067
(Clone quality: bE138E14 on chr=4; Num_of_Contigs=3; )
BCL10 ENSSSCG00000003084 6:35795909-35798721   CU459172,CH242-480J10,6:35756411-35818672
(Clone quality: bE480J10 on chr=6; Num_of_Contigs=12; )
BCL10 ENSSSCG00000008077 3:37784228-37788164    
BCL10 location ⇒ 4:135612621-135612910   CU179752,CH242-138E14,4:135457241-135636067
(Clone quality: bE138E14 on chr=4; Num_of_Contigs=3; )
BCL10 location ⇒ 4:135615141-135615426   CU179752,CH242-138E14,4:135457241-135636067
(Clone quality: bE138E14 on chr=4; Num_of_Contigs=3; )
BCL10 location ⇒ 4:135683991-135683706   CU595636,CH242-517I9,4:135636068-135693254
(Clone quality: bE517I9 on chr=4; Num_of_Contigs=3; )
BCL10 location ⇒ 4:135686511-135686222   CU595636,CH242-517I9,4:135636068-135693254
(Clone quality: bE517I9 on chr=4; Num_of_Contigs=3; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-28

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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