A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
NDRG4 location ⇒ 6:19338582-19338523   FP236673,CH242-274G15,6:19307220-19353552
(Clone quality: bE274G15 on chr=6; Num_of_Contigs=4; )
NDRG4 location ⇒ 6:19339468-19339361   FP236673,CH242-274G15,6:19307220-19353552
(Clone quality: bE274G15 on chr=6; Num_of_Contigs=4; )
NDRG4 location ⇒ 6:19340029-19339942   FP236673,CH242-274G15,6:19307220-19353552
(Clone quality: bE274G15 on chr=6; Num_of_Contigs=4; )
NDST2   ENSSSCG00000010310 14:79828336-79834081   CU640439,CH242-168L21,14:79822021-79894539
(Clone quality: bE168L21 on chr=14; Num_of_Contigs=4; )
NDST3   ENSSSCG00000009115 8:90802974-90936245    
NDUFA1   ENSSSCG00000012615 X:96389917-96394053 CU929805,CH242-458G8,X:96389436-96407575
(Clone quality: bE458G8 on chr=X; Num_of_Contigs=7; ) 		 
NDUFA10   ENSSSCG00000016349 15:131193740-131226589    
NDUFA12   ENSSSCG00000000905 5:83512621-83536734    
NDUFA2 ENSSSCG00000014371 2:129367171-129369222   CU459055,CH242-430O11,2:129351567-129383244
(Clone quality: bE430O11 on chr=2; Num_of_Contigs=5; )
NDUFA2 location ⇒ 3:36228478-36228407   CU467714,CH242-272G6,3:36227225-36246534
(Clone quality: bE272G6 on chr=3; Num_of_Contigs=16; )
NDUFA2 location ⇒ 3:36229189-36228785   CU467714,CH242-272G6,3:36227225-36246534
(Clone quality: bE272G6 on chr=3; Num_of_Contigs=16; )
NDUFA4   ENSSSCG00000011341 13:25514864-25515109   CU929897,CH242-249I18,13:25510170-25539251
(Clone quality: bE249I18 on chr=13; Num_of_Contigs=19; )
NDUFA4L2   ENSSSCG00000000420 5:21374983-21377063   CU633428,CH242-524E23,5:21373043-21392203
(Clone quality: bE524E23 on chr=5; Num_of_Contigs=9; )
NDUFA7   ENSSSCG00000013596 2:51612684-51619518   FP090904,CH242-212F1,2:51608045-51700090
(Clone quality: bE212F1 on chr=2; Num_of_Contigs=2; )
NDUFA8   ENSSSCG00000005528 1:276014785-276029823    
NDUFA9   ENSSSCG00000000719 5:61472379-61532019    
NDUFAB1   ENSSSCG00000010795 10:50613-62614   CU929008,CH242-207N16,10:36882-91422
(Clone quality: bE207N16 on chr=10; Num_of_Contigs=6; )
NDUFAF1   ENSSSCG00000004748 1:136415916-136421724    
NDUFAF3   ENSSSCG00000011371 13:26606985-26608256   CU466318,CH242-524L17,13:26606894-26645646
(Clone quality: bE524L17 on chr=13; Num_of_Contigs=16; )
NDUFAF4   ENSSSCG00000004342 1:67299067-67305576    
NDUFB1   ENSSSCG00000002449 7:121705776-121707569   CU468363,CH242-488L12,7:121705269-121709100
(Clone quality: bE488L12 on chr=7; Num_of_Contigs=13; )
NDUFB11   ENSSSCG00000012274 X:42013249-42016063   FP015817,CH242-9O15,X:41985702-42019060
(Clone quality: bE9O15 on chr=X; Num_of_Contigs=9; )
NDUFB2   ENSSSCG00000016495 18:7521140-7536333   CU861954,CH242-234F22,18:7394978-7580916
(Clone quality: bE234F22 on chr=18; Num_of_Contigs=1; )
NDUFB3 location ⇒ 1:141720962-141720654   CU469477,CH242-215L12,1:141624446-141739671
(Clone quality: bE215L12 on chr=1; Num_of_Contigs=4; )
NDUFB3 location ⇒ 1:141814630-141814938   CU074325,CH242-155M13,1:141794379-141842356
(Clone quality: bE155M13 on chr=1; Num_of_Contigs=9; )
NDUFB3 location ⇒ 1:190657151-190657471   CU855535,CH242-458A16,1:190619350-190675937
(Clone quality: bE458A16 on chr=1; Num_of_Contigs=5; )
NDUFB5   ENSSSCG00000011764 13:89412259-89427121    
NDUFB6 ENSSSCG00000011003 10:32445314-32460773   CU928691,CH242-242E10,10:32318250-32480524
(Clone quality: bE242E10 on chr=10; Num_of_Contigs=1; )
NDUFB6 location ⇒ 10:32445297-32445466   CU928691,CH242-242E10,10:32318250-32480524
(Clone quality: bE242E10 on chr=10; Num_of_Contigs=1; )
NDUFB7   ENSSSCG00000013778 2:57238620-57264277    
NDUFB8   ENSSSCG00000006166 4:60694653-60701219    
NDUFB9   ENSSSCG00000005976 4:14848773-14856749   CU468433,CH242-46N16,4:14812256-14877054
(Clone quality: bE46N16 on chr=4; Num_of_Contigs=6; )
NDUFC2   ENSSSCG00000014889 9:12493741-12499800   FP090886,CH242-508E3,9:12476781-12503029
(Clone quality: bE508E3 on chr=9; Num_of_Contigs=14; )
NDUFS1   ENSSSCG00000016127 15:102184944-102223130    
NDUFS2 ENSSSCG00000006358 4:92755418-92765537   CU606874,CH242-28G15,4:92745461-92814223
(Clone quality: bE28G15 on chr=4; Num_of_Contigs=6; )
NDUFS2 location ⇒ 4:92755651-92755422   CU606874,CH242-28G15,4:92745461-92814223
(Clone quality: bE28G15 on chr=4; Num_of_Contigs=6; )
NDUFS2 location ⇒ 4:92757058-92756927   CU606874,CH242-28G15,4:92745461-92814223
(Clone quality: bE28G15 on chr=4; Num_of_Contigs=6; )
NDUFS2 location ⇒ 4:92758306-92758183   CU606874,CH242-28G15,4:92745461-92814223
(Clone quality: bE28G15 on chr=4; Num_of_Contigs=6; )
NDUFS2 location ⇒ 4:92761723-92761531   CU606874,CH242-28G15,4:92745461-92814223
(Clone quality: bE28G15 on chr=4; Num_of_Contigs=6; )
NDUFS3   ENSSSCG00000013229 2:13081738-13087704   CU856103,CH242-271O6,2:12985573-13119992
(Clone quality: bE271O6 on chr=2; Num_of_Contigs=3; )
NDUFS4   ENSSSCG00000016893 16:30172556-30249293    
NDUFS6   ENSSSCG00000017114 16:76522601-76528691   CU640453,CH242-254N17,16:76513459-76535691
(Clone quality: bE254N17 on chr=16; Num_of_Contigs=6; )
NDUFV1   ENSSSCG00000012896 2:3302877-3308555   CU856401,CH242-191A12,2:3294296-3314165
(Clone quality: bE191A12 on chr=2; Num_of_Contigs=8; )
NEB   ENSSSCG00000016397 15:133973904-134062152    
NEB location ⇒ 15:133854781-133854854   CU856324,CH242-167H23,15:133853960-133885623
(Clone quality: bE167H23 on chr=15; Num_of_Contigs=8; )
NEB location ⇒ 15:133975866-133975778   CU856324,CH242-167H23,15:133969157-133986778
(Clone quality: bE167H23 on chr=15; Num_of_Contigs=8; )
NEB location ⇒ 15:134082342-134082418   CU469248,CH242-517J1,15:134079498-134100867
(Clone quality: bE517J1 on chr=15; Num_of_Contigs=11; )
NEB location ⇒ 15:134150668-134150749   CU469248,CH242-517J1,15:134141070-134159083
(Clone quality: bE517J1 on chr=15; Num_of_Contigs=11; )
NEBL   ENSSSCG00000011090 10:51344182-51448467    
NECAB1   ENSSSCG00000006122 4:46573263-46948813    
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-29

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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