A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
Q866A6_PIG   ENSSSCG00000013918 2:62965062-62966000   CU928669,CH242-407A11,2:62947668-62996424
(Clone quality: bE407A11 on chr=2; Num_of_Contigs=14; )
Q8HXA5_PIG   ENSSSCG00000006476 4:97229068-97230247   FP102690,CH242-379E5,4:97228660-97231109
(Clone quality: bE379E5 on chr=4; Num_of_Contigs=15; )
Q8HYQ7_PIG   ENSSSCG00000000581 5:49968135-49975770    
Q8HYS4_PIG   ENSSSCG00000005751 1:289445043-289661492    
Q8HYS4_PIG   ENSSSCG00000005751 1:289445043-289661492    
Q8MIB4_PIG   ENSSSCG00000010958 10:29038187-29038468   CU633412,CH242-406E8,10:29037625-29043079
(Clone quality: bE406E8 on chr=10; Num_of_Contigs=25; )
Q8MIM1_PIG   ENSSSCG00000004073 1:13461375-13463119   CU928626,CH242-145A15,1:13453835-13476610
(Clone quality: bE145A15 on chr=1; Num_of_Contigs=12; )
Q8MIR6_PIG   ENSSSCG00000007832 3:20634924-20642192   CU855526,CH242-35O6,3:20631575-20646907
(Clone quality: bE35O6 on chr=3; Num_of_Contigs=7; )
Q8MJG2_PIG   ENSSSCG00000011132 10:60922824-60922973   FP017244,CH242-47I18,10:60921937-60979245
(Clone quality: bE47I18 on chr=10; Num_of_Contigs=6; )
Q8MJG3_PIG   ENSSSCG00000010382 14:93048509-93049152   CT737310,CH242-101E20,14:93032339-93068499
(Clone quality: bE101E20 on chr=14; Num_of_Contigs=2; )
Q8MJM4_PIG   ENSSSCG00000011506 13:42295156-42320494   CU464138,CH242-109C12,13:42287397-42337464
(Clone quality: bE109C12 on chr=13; Num_of_Contigs=5; )
Q8MJM4_PIG   ENSSSCG00000011509 13:42380207-42404852    
Q8MJX9_PIG   ENSSSCG00000017917 12:49319605-49334658    
Q8MJX9_PIG   ENSSSCG00000017911 12:49213115-49263899    
Q8MJX9_PIG   ENSSSCG00000017911 12:49213115-49263899    
Q8N682 ENSSSCG00000000861 5:77645610-77663463   CU896609,CH242-347A3,5:77643302-77664475
(Clone quality: bE347A3 on chr=5; Num_of_Contigs=12; )
Q8SPJ4_PIG   ENSSSCG00000010697 14:137543683-137543820   CU468911,CH242-225J8,14:137543380-137544091
(Clone quality: bE225J8 on chr=14; Num_of_Contigs=25; )
Q8SPK4_PIG   ENSSSCG00000005133 1:209515382-209515690   CU915634,CH242-510N24,1:209509548-209517332
(Clone quality: bE510N24 on chr=1; Num_of_Contigs=8; )
Q8SQ44_PIG   ENSSSCG00000008032 3:36269725-36271745   CU467714,CH242-272G6,3:36263989-36272123
(Clone quality: bE272G6 on chr=3; Num_of_Contigs=16; )
Q8SQ68_PIG   ENSSSCG00000002993 6:33615478-33623040   CU928654,CH242-130A3,6:33589010-33635086
(Clone quality: bE130A3 on chr=6; Num_of_Contigs=6; )
Q8SQ68_PIG   ENSSSCG00000002993 6:33615478-33623040   CU928654,CH242-130A3,6:33589010-33635086
(Clone quality: bE130A3 on chr=6; Num_of_Contigs=6; )
Q8TC26 ENSSSCG00000015700 15:15543730-15915160    
Q8WMG4_PIG   ENSSSCG00000003069 6:35179897-35193384    
Q95275_PIG   ENSSSCG00000000402 5:20860035-20946973    
Q95286_PIG   ENSSSCG00000001156 7:22390114-22392614   CU469443,CH242-512F24,7:22384454-22396216
(Clone quality: bE512F24 on chr=7; Num_of_Contigs=14; )
Q95291_PIG   ENSSSCG00000016523 18:10813454-10831476    
Q95295_PIG   ENSSSCG00000002516 7:130456380-130480470   CU914713,CH242-352I21,7:130453992-130481246
(Clone quality: bE352I21 on chr=7; Num_of_Contigs=15; )
Q95295_PIG   ENSSSCG00000002518 7:130578263-130603646    
Q95306_PIG   ENSSSCG00000004256 1:46541654-46549790   CU407254,CH242-450A14,1:46540392-46557801
(Clone quality: bE450A14 on chr=1; Num_of_Contigs=8; )
Q95306_PIG   ENSSSCG00000004256 1:46541654-46549790   CU407254,CH242-450A14,1:46540392-46557801
(Clone quality: bE450A14 on chr=1; Num_of_Contigs=8; )
Q95315_PIG   ENSSSCG00000005448 1:263163036-263167984   CU638717,CH242-176K19,1:263123683-263188501
(Clone quality: bE176K19 on chr=1; Num_of_Contigs=5; )
Q95JA3_PIG   ENSSSCG00000017582 12:24682654-24682728   CU694879,CH242-301O20,12:24681689-24690254
(Clone quality: bE301O20 on chr=12; Num_of_Contigs=13; )
Q95JA6_PIG   ENSSSCG00000015357 9:79533339-79533851   CU469257,CH242-80B4,9:79532161-79538187
(Clone quality: bE80B4 on chr=9; Num_of_Contigs=12; )
Q95L19_PIG   ENSSSCG00000017509 12:21069332-21074289   FP085518,CH242-274F4,12:21003722-21101963
(Clone quality: bE274F4 on chr=12; Num_of_Contigs=3; )
Q95N04_PIG   ENSSSCG00000015030 9:38602362-38625849    
Q96AQ2 location ⇒ 6:120205649-120206305   CU694684,CH242-210N13,6:120172350-120225775
(Clone quality: bE210N13 on chr=6; Num_of_Contigs=11; )
Q96AQ2 location ⇒ 6:120314458-120313802   FP102012,CH242-136J24,6:120277096-120383099
(Clone quality: bE136J24 on chr=6; Num_of_Contigs=3; )
Q99331_PIG   ENSSSCG00000004982 1:177450161-177457786   CU639454,CH242-168O7,1:177425380-177461060
(Clone quality: bE168O7 on chr=1; Num_of_Contigs=4; )
Q99331_PIG   ENSSSCG00000004987 1:177650199-177657824   FP067374,CH242-259E12,1:177602688-177664256
(Clone quality: bE259E12 on chr=1; Num_of_Contigs=2; )
Q9BDH4_PIG   ENSSSCG00000008963 8:59687058-59690763   FP236682,CH242-469E11,8:59686247-59692235
(Clone quality: bE469E11 on chr=8; Num_of_Contigs=18; )
Q9BDS3_PIG   ENSSSCG00000016183 15:113384840-113396203    
Q9BDS4_PIG   ENSSSCG00000016184 15:113424084-113426699    
Q9GK20_PIG   ENSSSCG00000009392 11:17940242-18022367    
Q9GKJ2_PIG   ENSSSCG00000011481 13:34039539-34045581   CU927912,CH242-524I3,13:34009927-34056008
(Clone quality: bE524I3 on chr=13; Num_of_Contigs=9; )
Q9GKJ2_PIG   ENSSSCG00000011475 13:33794264-33800306   CU914707,CH242-290I23,13:33655629-33831490
(Clone quality: bE290I23 on chr=13; Num_of_Contigs=1; )
Q9GKJ3_PIG   ENSSSCG00000011866 13:102657133-102917415    
Q9GKP8_PIG   ENSSSCG00000001902 7:64303265-64309532   CU468845,CH242-162A4,7:64176153-64332301
(Clone quality: bE162A4 on chr=7; Num_of_Contigs=2; )
Q9GL49_PIG   ENSSSCG00000004906 1:168066314-168069258   CU633494,CH242-198F23,1:168026905-168104475
(Clone quality: bE198F23 on chr=1; Num_of_Contigs=5; )
Q9GL49_PIG   ENSSSCG00000004905 1:167846905-167849849   CU855866,CH242-18C13,1:167831711-167849989
(Clone quality: bE18C13 on chr=1; Num_of_Contigs=11; )
Q9GLL8_PIG   ENSSSCG00000009315 11:4849478-4853710   CU861636,CH242-487J22,11:4843102-4855584
(Clone quality: bE487J22 on chr=11; Num_of_Contigs=10; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-35

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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