A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
RAS location ⇒ 12:49993656-49993734 CU914279,CH242-411E2,12:49887557-50072341
(Clone quality: bE411E2 on chr=10; Num_of_Contigs=3; ) 		 
RAS location ⇒ 12:49994107-49994232 CU914279,CH242-411E2,12:49887557-50072341
(Clone quality: bE411E2 on chr=10; Num_of_Contigs=3; ) 		 
RAS location ⇒ 12:49994674-49994739 CU914279,CH242-411E2,12:49887557-50072341
(Clone quality: bE411E2 on chr=10; Num_of_Contigs=3; ) 		 
RASA1 ENSSSCG00000014146 2:84454552-84507598   CU855959,CH242-123E22,2:84454292-84608873
(Clone quality: bE123E22 on chr=2; Num_of_Contigs=1; )
RASA1 location ⇒ 2:84488062-84488179   CU855959,CH242-123E22,2:84454292-84608873
(Clone quality: bE123E22 on chr=2; Num_of_Contigs=1; )
RASA1 location ⇒ 2:84490509-84490681   CU855959,CH242-123E22,2:84454292-84608873
(Clone quality: bE123E22 on chr=2; Num_of_Contigs=1; )
RASA1 location ⇒ 2:84491005-84491166   CU855959,CH242-123E22,2:84454292-84608873
(Clone quality: bE123E22 on chr=2; Num_of_Contigs=1; )
RASA1 location ⇒ 2:84493166-84493281   CU855959,CH242-123E22,2:84454292-84608873
(Clone quality: bE123E22 on chr=2; Num_of_Contigs=1; )
RASA2 ENSSSCG00000011672 13:67052013-67145729    
RASA3   ENSSSCG00000009567 11:79213291-79288711    
RASAL1   ENSSSCG00000009874 14:38955348-38987194    
RASAL2   ENSSSCG00000015519 9:112943947-113056779    
RASAL3   ENSSSCG00000013839 2:60357308-60365724   CU914413,CH242-247L20,2:60356868-60368411
(Clone quality: bE247L20 on chr=2; Num_of_Contigs=8; )
RASD1   ENSSSCG00000018054 12:56997679-56998815   CU927962,CH242-273I13,12:56891060-57001521
(Clone quality: bE273I13 on chr=12; Num_of_Contigs=8; )
RASEF   ENSSSCG00000010964 10:30472267-30519851    
RASGEF1A   ENSSSCG00000010201 14:63807205-63837932   CT990536,CH242-194C16,14:63711553-63927511
(Clone quality: bE194C16 on chr=14; Num_of_Contigs=1; )
RASGEF1C   ENSSSCG00000014011 2:67718152-67738189   CU927929,CH242-480L24,2:67623355-67738874
(Clone quality: bE480L24 on chr=2; Num_of_Contigs=16; )
RASGRF1   ENSSSCG00000001771 7:54157221-54281253    
RASGRF2   ENSSSCG00000014127 2:78913961-79097756    
RASGRP1 ENSSSCG00000004791 1:139432964-139514304    
RASGRP1 location ⇒ 1:139501231-139501152   CU861587,CH242-171J17,1:139482903-139563221
(Clone quality: bE171J17 on chr=1; Num_of_Contigs=1; )
RASGRP1 location ⇒ 1:139504072-139503685   CU861587,CH242-171J17,1:139482903-139563221
(Clone quality: bE171J17 on chr=1; Num_of_Contigs=1; )
RASGRP1 location ⇒ 1:139514160-139513947   CU861587,CH242-171J17,1:139482903-139563221
(Clone quality: bE171J17 on chr=1; Num_of_Contigs=1; )
RASGRP2   ENSSSCG00000013023 2:5823661-5839410 FP101995,CH242-228D7,2:5823339-5853410
(Clone quality: bE228D7 on chr=2; Num_of_Contigs=13; ) 		 
RASGRP3 ENSSSCG00000008509 3:99626154-99731156    
RASGRP3 location ⇒ 3:99647091-99647013   CU929682,CH242-118G16,3:99609035-99657110
(Clone quality: bE118G16 on chr=3; Num_of_Contigs=4; )
RASGRP3 location ⇒ 3:99655134-99654857   CU929682,CH242-118G16,3:99609035-99657110
(Clone quality: bE118G16 on chr=3; Num_of_Contigs=4; )
RASGRP3 location ⇒ 3:99657243-99657125   CU914288,CH242-524O4,3:99657111-99660013
(Clone quality: bE524O4 on chr=3; Num_of_Contigs=10; )
RASGRP3 location ⇒ 3:99657806-99657633   CU914288,CH242-524O4,3:99657111-99660013
(Clone quality: bE524O4 on chr=3; Num_of_Contigs=10; )
RASGRP4 ENSSSCG00000002960 6:32528720-32541454   FP236590,CH242-507G2,6:32461085-32547641
(Clone quality: bE507G2 on chr=6; Num_of_Contigs=4; )
RASL10B   ENSSSCG00000017711 12:37588594-37594462   CU914398,CH242-121H9,12:37483147-37597733
(Clone quality: bE121H9 on chr=12; Num_of_Contigs=11; )
RASL11A   ENSSSCG00000009304 11:3817403-3819715    
RASL11B   ENSSSCG00000008835 8:34044032-34047741   CU463074,CH242-13G17,8:34018348-34048302
(Clone quality: bE13G17 on chr=8; Num_of_Contigs=7; )
RASL12   ENSSSCG00000004924 1:170123391-170135848    
RASSF1   ENSSSCG00000011407 13:27477768-27486296   CU861907,CH242-10C8,13:27455563-27490719
(Clone quality: bE10C8 on chr=13; Num_of_Contigs=3; )
RASSF2   ENSSSCG00000007042 17:13317428-13336549   CU606954,CH242-10N11,17:13288012-13362205
(Clone quality: bE10N11 on chr=17; Num_of_Contigs=7; )
RASSF4   ENSSSCG00000010411 14:95388222-95398918   CU571115,CH242-206O10,14:95351674-95402190
(Clone quality: bE206O10 on chr=14; Num_of_Contigs=3; )
RASSF5 ENSSSCG00000015646 9:131600428-131604162    
RASSF5 location ⇒ 9:1683466-1683361   CU856570,CH242-196K14,9:1666508-1693546
(Clone quality: bE196K14 on chr=9; Num_of_Contigs=4; )
RASSF5 location ⇒ 9:295666-295759   FP102436,CH242-219P18,9:279164-310715
(Clone quality: bE219P18 on chr=9; Num_of_Contigs=6; )
RASSF5 location ⇒ 9:551296-551227   CU638718,CH242-178L14,9:538762-601809
(Clone quality: bE178L14 on chr=9; Num_of_Contigs=6; )
RASSF5 location ⇒ 9:644713-644786   CU638718,CH242-178L14,9:612105-656633
(Clone quality: bE178L14 on chr=9; Num_of_Contigs=6; )
RASSF6   ENSSSCG00000008952 8:59147931-59170508   CU606945,CH242-230P13,8:59136498-59224831
(Clone quality: bE230P13 on chr=8; Num_of_Contigs=3; )
RASSF7   ENSSSCG00000012854 2:334419-336140   FP015900,CH242-40P17,2:291676-352927
(Clone quality: bE40P17 on chr=2; Num_of_Contigs=6; )
RASSF8   ENSSSCG00000000559 5:46303709-46412168    
RAVER1   ENSSSCG00000013650 2:53167362-53179202   CU657936,CH242-239H17,2:53128518-53215272
(Clone quality: bE239H17 on chr=2; Num_of_Contigs=8; )
RAX   ENSSSCG00000004910 1:168569985-168573896   CU076088,CH242-77M4,1:168411868-168596075
(Clone quality: bE77M4 on chr=1; Num_of_Contigs=1; )
RAX2   ENSSSCG00000013493 2:48272750-48273879   FP102497,CH242-307J7,2:48199823-48346436
(Clone quality: bE307J7 on chr=2; Num_of_Contigs=2; )
RB1 ENSSSCG00000009401 11:18639886-18785828    
RB1 location ⇒ 11:18640170-18640107   CU406986,CH242-455N14,11:18618991-18709564
(Clone quality: bE455N14 on chr=11; Num_of_Contigs=2; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-16

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

© 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team