A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
BCL11A ENSSSCG00000008392 3:74933698-75032194    
BCL11A location ⇒ 3:74933798-74933948   CU915648,CH242-517P20,3:74933478-74945916
(Clone quality: bE517P20 on chr=3; Num_of_Contigs=6; )
BCL11A location ⇒ 3:74941008-74941342   CU915648,CH242-517P20,3:74933478-74945916
(Clone quality: bE517P20 on chr=3; Num_of_Contigs=6; )
BCL11A location ⇒ 3:75020190-75020335   CU463236,CH242-171G18,3:74988771-75023219
(Clone quality: bE171G18 on chr=3; Num_of_Contigs=2; )
BCL11A location ⇒ 3:75031682-75032193   CU463236,CH242-171G18,3:75023320-75180060
(Clone quality: bE171G18 on chr=3; Num_of_Contigs=2; )
BCL11B ENSSSCG00000002507 7:129488051-129578748    
BCL11B location ⇒ 7:129485576-129483129 CT757498,CH242-28M23,7:129468057-129575310
(Clone quality: bE28M23 on chr=7; Num_of_Contigs=1; ) 		 
BCL2 ENSSSCG00000004895 1:165316469-165317235   CU694588,CH242-25E9,1:165295255-165318637
(Clone quality: bE25E9 on chr=1; Num_of_Contigs=5; )
BCL2 ENSSSCG00000000768 5:65471948-65530801    
BCL2 location ⇒ 1:165482863-165483851   CU075404,CH242-152D17,1:165478890-165574835
(Clone quality: bE152D17 on chr=1; Num_of_Contigs=4; )
BCL2 location ⇒ 1:165483895-165484095   CU075404,CH242-152D17,1:165478890-165574835
(Clone quality: bE152D17 on chr=1; Num_of_Contigs=4; )
BCL2A1 ENSSSCG00000001778 7:54892325-54903104   CT757439,CH242-116D12,7:54880969-54976613
(Clone quality: bE116D12 on chr=7; Num_of_Contigs=2; )
BCL2A1 location ⇒ 7:54892328-54892600   CT757439,CH242-116D12,7:54880969-54976613
(Clone quality: bE116D12 on chr=7; Num_of_Contigs=2; )
BCL2A1 location ⇒ 7:54902419-54902843   CT757439,CH242-116D12,7:54880969-54976613
(Clone quality: bE116D12 on chr=7; Num_of_Contigs=2; )
BCL2L1 ENSSSCG00000007229 17:37346021-37346965    
BCL2L1 location ⇒ 17:37347008-37346421   CU633584,CH242-3H14,17:37346421-37357840
(Clone quality: bE3H14 on chr=17; Num_of_Contigs=10; )
BCL2L1 location ⇒ 17:37347100-37346421   CU633584,CH242-3H14,17:37346421-37357840
(Clone quality: bE3H14 on chr=17; Num_of_Contigs=10; )
BCL2L1 location ⇒ 17:37347612-37347399   CU633584,CH242-3H14,17:37346421-37357840
(Clone quality: bE3H14 on chr=17; Num_of_Contigs=10; )
BCL2L1 location ⇒ 17:37363128-37361990   CU633584,CH242-3H14,17:37361965-37368089
(Clone quality: bE3H14 on chr=17; Num_of_Contigs=10; )
BCL2L10 ENSSSCG00000004623 1:124460310-124462934   CU468047,CH242-327N5,1:124446866-124539726
(Clone quality: bE327N5 on chr=1; Num_of_Contigs=4; )
BCL2L11 ENSSSCG00000008108 3:40497752-40539453    
BCL2L12 ENSSSCG00000003177 6:38183285-38189408   FP102630,CH242-21M22,6:38167343-38193012
(Clone quality: bE21M22 on chr=6; Num_of_Contigs=8; )
BCL2L13 ENSSSCG00000000768 5:65471948-65530801    
BCL2L14 location ⇒ 5:57329927-57329479   CU633597,CH242-510M9,5:57325165-57331451
(Clone quality: bE510M9 on chr=5; Num_of_Contigs=7; )
BCL2L14 location ⇒ 5:57347887-57348316   CU633597,CH242-510M9,5:57346279-57354104
(Clone quality: bE510M9 on chr=5; Num_of_Contigs=7; )
BCL2L14 location ⇒ 5:57405174-57405622   CU633532,CH242-132K20,5:57388382-57422318
(Clone quality: bE132K20 on chr=5; Num_of_Contigs=6; )
BCL2L14 location ⇒ 5:57419475-57419904   CU633532,CH242-132K20,5:57388382-57422318
(Clone quality: bE132K20 on chr=5; Num_of_Contigs=6; )
BCL2L15   ENSSSCG00000006763 4:111031059-111037210   CU651648,CH242-226J22,4:110972280-111079200
(Clone quality: bE226J22 on chr=4; Num_of_Contigs=4; )
BCL2L2 ENSSSCG00000002022 7:82044661-82045905   CU633625,CH242-116C14,7:82041923-82116183
(Clone quality: bE116C14 on chr=7; Num_of_Contigs=8; )
BCL2L2 location ⇒ 7:82047994-82048558   CU633625,CH242-116C14,7:82041923-82116183
(Clone quality: bE116C14 on chr=7; Num_of_Contigs=8; )
BCL2L2 location ⇒ 7:82048609-82048676   CU633625,CH242-116C14,7:82041923-82116183
(Clone quality: bE116C14 on chr=7; Num_of_Contigs=8; )
BCL3 ENSSSCG00000010580 14:118388488-118392800   CU498828,CH242-221N13,14:118380814-118392829
(Clone quality: bE221N13 on chr=14; Num_of_Contigs=8; )
BCL3 ENSSSCG00000003084 6:35795909-35798721   CU459172,CH242-480J10,6:35756411-35818672
(Clone quality: bE480J10 on chr=6; Num_of_Contigs=12; )
BCL3 location ⇒ 6:35796417-35795879   CU459172,CH242-480J10,6:35756411-35818672
(Clone quality: bE480J10 on chr=6; Num_of_Contigs=12; )
BCL3 location ⇒ 6:35796755-35796635   CU459172,CH242-480J10,6:35756411-35818672
(Clone quality: bE480J10 on chr=6; Num_of_Contigs=12; )
BCL3 location ⇒ 6:35797248-35797075   CU459172,CH242-480J10,6:35756411-35818672
(Clone quality: bE480J10 on chr=6; Num_of_Contigs=12; )
BCL3 location ⇒ 6:35798381-35798204   CU459172,CH242-480J10,6:35756411-35818672
(Clone quality: bE480J10 on chr=6; Num_of_Contigs=12; )
BCL6 ENSSSCG00000017927 12:49566645-49569929   CU914703,CH242-254H21,12:49564591-49589172
(Clone quality: bE254H21 on chr=12; Num_of_Contigs=9; )
BCL6 ENSSSCG00000012655 X:104737635-104779720    
BCL6 ENSSSCG00000012241 X:35251141-35282192    
BCL6 ENSSSCG00000011810 13:94765937-94777523   CU466378,CH242-185B2,13:94764414-94780737
(Clone quality: bE185B2 on chr=13; Num_of_Contigs=3; )
BCL6 location ⇒ 13:94772496-94772372   CU466378,CH242-185B2,13:94764414-94780737
(Clone quality: bE185B2 on chr=13; Num_of_Contigs=3; )
BCL6 location ⇒ 13:94773561-94773024   CU466378,CH242-185B2,13:94764414-94780737
(Clone quality: bE185B2 on chr=13; Num_of_Contigs=3; )
BCL6B ENSSSCG00000017927 12:49566645-49569929   CU914703,CH242-254H21,12:49564591-49589172
(Clone quality: bE254H21 on chr=12; Num_of_Contigs=9; )
BCL6B location ⇒ 12:49566854-49566645   CU914703,CH242-254H21,12:49564591-49589172
(Clone quality: bE254H21 on chr=12; Num_of_Contigs=9; )
BCL6B location ⇒ 12:49567357-49567216   CU914703,CH242-254H21,12:49564591-49589172
(Clone quality: bE254H21 on chr=12; Num_of_Contigs=9; )
BCL6B location ⇒ 12:49567603-49567468   CU914703,CH242-254H21,12:49564591-49589172
(Clone quality: bE254H21 on chr=12; Num_of_Contigs=9; )
BCL6B location ⇒ 12:49567931-49567694   CU914703,CH242-254H21,12:49564591-49589172
(Clone quality: bE254H21 on chr=12; Num_of_Contigs=9; )
BCL7A ENSSSCG00000009801 14:30720877-30753296    
BCL7A location ⇒ 14:30718835-30718631   CU468392,CH242-200M3,14:30706566-30752352
(Clone quality: bE200M3 on chr=14; Num_of_Contigs=3; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-28

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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