A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
LGMN location ⇒ 7:122283047-122283162   CU467720,CH242-289F13,7:122278884-122284724
(Clone quality: bE289F13 on chr=7; Num_of_Contigs=18; )
LGP2 ENSSSCG00000017416 12:18380106-18388791   CU856598,CH242-362F6,12:18319906-18418389
(Clone quality: bE362F6 on chr=12; Num_of_Contigs=5; )
LGP2 location ⇒ 12:18380262-18380390   CU856598,CH242-362F6,12:18319906-18418389
(Clone quality: bE362F6 on chr=12; Num_of_Contigs=5; )
LGP2 location ⇒ 12:18380524-18380696   CU856598,CH242-362F6,12:18319906-18418389
(Clone quality: bE362F6 on chr=12; Num_of_Contigs=5; )
LGP2 location ⇒ 12:18380901-18381103   CU856598,CH242-362F6,12:18319906-18418389
(Clone quality: bE362F6 on chr=12; Num_of_Contigs=5; )
LGP2 location ⇒ 12:18381494-18381685   CU856598,CH242-362F6,12:18319906-18418389
(Clone quality: bE362F6 on chr=12; Num_of_Contigs=5; )
LGR4   ENSSSCG00000013335 2:30907352-31012103    
LGR6   ENSSSCG00000010923 10:24470364-24505919   CU929522,CH242-133L15,10:24469362-24590809
(Clone quality: bE133L15 on chr=10; Num_of_Contigs=3; )
LGSN   ENSSSCG00000004450 1:86566804-86581450    
LGTN ENSSSCG00000015648 9:131714031-131734216    
LGTN location ⇒ 9:131595076-131595279   FP102762,CH242-93E16,9:131593676-131603763
(Clone quality: bE93E16 on chr=9; Num_of_Contigs=10; )
LGTN location ⇒ 9:131714237-131714034   CU633844,CH242-3I15,9:131691528-131723324
(Clone quality: bE3I15 on chr=9; Num_of_Contigs=8; )
LGTN location ⇒ 9:131733128-131732935   CU633844,CH242-3I15,9:131723425-131750889
(Clone quality: bE3I15 on chr=9; Num_of_Contigs=8; )
LGTN location ⇒ 9:131734213-131734029   CU633844,CH242-3I15,9:131723425-131750889
(Clone quality: bE3I15 on chr=9; Num_of_Contigs=8; )
LHCGR   ENSSSCG00000008421 3:85340593-85404790    
LHFPL1   ENSSSCG00000012590 X:90386811-90444584    
LHFPL2 ENSSSCG00000014104 2:76352955-76380282   CU467790,CH242-520F21,2:76299276-76401251
(Clone quality: bE520F21 on chr=2; Num_of_Contigs=6; )
LHFPL4   ENSSSCG00000011543 13:55029025-55075991    
LHFPL5   ENSSSCG00000001553 7:36245482-36253421   CT868716,CH242-516I1,7:36091251-36290487
(Clone quality: bE516I1 on chr=7; Num_of_Contigs=1; )
LHPP   ENSSSCG00000010735 14:140756329-140873324    
LHX1   ENSSSCG00000017692 12:36770899-36776001   CU929499,CH242-167B14,12:36768780-36783717
(Clone quality: bE167B14 on chr=12; Num_of_Contigs=5; )
LHX2 ENSSSCG00000005586 1:279506088-279525564   CU570864,CH242-79L10,1:279500106-279525665
(Clone quality: bE79L10 on chr=1; Num_of_Contigs=5; )
LHX4   ENSSSCG00000015536 9:114353971-114354171   CU855640,CH242-212M8,9:114274421-114355557
(Clone quality: bE212M8 on chr=9; Num_of_Contigs=4; )
LHX5   ENSSSCG00000009869 14:38805106-38813420   CU468670,CH242-408G16,14:38775899-38815330
(Clone quality: bE408G16 on chr=14; Num_of_Contigs=3; )
LHX6   ENSSSCG00000005530 1:276069552-276092126    
LHX8   ENSSSCG00000003778 6:96651903-96678326   CU929623,CH242-319E15,6:96635589-96840867
(Clone quality: bE319E15 on chr=6; Num_of_Contigs=1; )
LIF ENSSSCG00000016850 16:21285935-21349971   CU929624,CH242-31K19,16:21261667-21439844
(Clone quality: bE31K19 on chr=16; Num_of_Contigs=2; )
LIF ENSSSCG00000009996 14:47999037-48002022 CT827833,CH242-227A13,14:47931258-48074674
(Clone quality: bE227A13 on chr=14; Num_of_Contigs=2; ) 		 
LIF location ⇒ 14:47996219-47995897 CT827833,CH242-227A13,14:47931258-48074674
(Clone quality: bE227A13 on chr=14; Num_of_Contigs=2; ) 		 
LIF location ⇒ 14:47999447-47996265 CT827833,CH242-227A13,14:47931258-48074674
(Clone quality: bE227A13 on chr=14; Num_of_Contigs=2; ) 		 
LIF location ⇒ 14:48000348-48000166 CT827833,CH242-227A13,14:47931258-48074674
(Clone quality: bE227A13 on chr=14; Num_of_Contigs=2; ) 		 
LIF location ⇒ 14:48002086-48002003 CT827833,CH242-227A13,14:47931258-48074674
(Clone quality: bE227A13 on chr=14; Num_of_Contigs=2; ) 		 
LIFR ENSSSCG00000016850 16:21285935-21349971   CU929624,CH242-31K19,16:21261667-21439844
(Clone quality: bE31K19 on chr=16; Num_of_Contigs=2; )
LIFR location ⇒ 16:21172310-21172404   CU633366,CH242-209G14,16:21149782-21240114
(Clone quality: bE209G14 on chr=16; Num_of_Contigs=10; )
LIFR location ⇒ 16:21174682-21174997   CU633366,CH242-209G14,16:21149782-21240114
(Clone quality: bE209G14 on chr=16; Num_of_Contigs=10; )
LIFR location ⇒ 16:21286560-21286245   CU929624,CH242-31K19,16:21261667-21439844
(Clone quality: bE31K19 on chr=16; Num_of_Contigs=2; )
LIFR location ⇒ 16:21288942-21288848   CU929624,CH242-31K19,16:21261667-21439844
(Clone quality: bE31K19 on chr=16; Num_of_Contigs=2; )
LIG1   ENSSSCG00000003128 6:37300984-37340532   FP102640,CH242-235B10,6:37275907-37358125
(Clone quality: bE235B10 on chr=6; Num_of_Contigs=12; )
LIG4 ENSSSCG00000009540 11:75986077-75988922    
LIG4 location ⇒ 11:75984583-75984512   CU019584,CH242-370B14,11:75964063-75986868
(Clone quality: bE370B14 on chr=11; Num_of_Contigs=3; )
LIG4 location ⇒ 11:75988922-75987076   CU019584,CH242-370B14,11:75986969-76035774
(Clone quality: bE370B14 on chr=11; Num_of_Contigs=3; )
LILRA1 location ⇒ 16:76927534-76927834   FP085477,CH242-128B1,16:76914107-76931682
(Clone quality: bE128B1 on chr=16; Num_of_Contigs=5; )
LILRA1 location ⇒ 16:76996113-76996413   FP085477,CH242-128B1,16:76988341-77076053
(Clone quality: bE128B1 on chr=16; Num_of_Contigs=5; )
LILRA1 location ⇒ 16:77012008-77012085   FP085477,CH242-128B1,16:76988341-77076053
(Clone quality: bE128B1 on chr=16; Num_of_Contigs=5; )
LILRA1 location ⇒ 16:77030677-77030977   FP085477,CH242-128B1,16:76988341-77076053
(Clone quality: bE128B1 on chr=16; Num_of_Contigs=5; )
LILRA2 location ⇒ 6:40679732-40679427   CU914171,CH242-113P17,6:40677454-40685481
(Clone quality: bE113P17 on chr=6; Num_of_Contigs=7; )
LILRA2 location ⇒ 6:40969797-40969910 CR450381,PigE-108A11,6:40950931-41074617
(No clone quality info on bT108A11) 		 
LILRA2 location ⇒ 6:40988214-40988327 CR450381,PigE-108A11,6:40950931-41074617
(No clone quality info on bT108A11) 		 
LILRA2 location ⇒ 6:41033800-41034105 CR450381,PigE-108A11,6:40950931-41074617
(No clone quality info on bT108A11) 		 
LILRA4L1 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-45

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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