A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
LILRA4L1* location ⇒ 6:12569-12650   FP102308,CH242-96G18,6:8267-26213
(Clone quality: bE96G18 on chr=6; Num_of_Contigs=17; )
LILRA4L1* location ⇒ 6:55524-55609   FP102308,CH242-96G18,6:54763-66373
(Clone quality: bE96G18 on chr=6; Num_of_Contigs=17; )
LILRA4L1* location ⇒ 6:68659-68538   FP102308,CH242-96G18,6:66474-71013
(Clone quality: bE96G18 on chr=6; Num_of_Contigs=17; )
LILRA4L1* location ⇒ 6:77428-77512   FP102308,CH242-96G18,6:74069-84470
(Clone quality: bE96G18 on chr=6; Num_of_Contigs=17; )
LILRA5 location ⇒ 6:40679719-40679428   CU914171,CH242-113P17,6:40677454-40685481
(Clone quality: bE113P17 on chr=6; Num_of_Contigs=7; )
LILRA5 location ⇒ 6:40970052-40970356 CR450381,PigE-108A11,6:40950931-41074617
(No clone quality info on bT108A11) 		 
LILRA5 location ⇒ 6:40988469-40988773 CR450381,PigE-108A11,6:40950931-41074617
(No clone quality info on bT108A11) 		 
LILRA5 location ⇒ 6:41033545-41033658 CR450381,PigE-108A11,6:40950931-41074617
(No clone quality info on bT108A11) 		 
LILRA6L1 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
LILRA6L2 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
LILRA6L3 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
LILRB2 location ⇒ 6:40679214-40678916   CU914171,CH242-113P17,6:40677454-40685481
(Clone quality: bE113P17 on chr=6; Num_of_Contigs=7; )
LILRB2 location ⇒ 6:40970570-40970868 CR450381,PigE-108A11,6:40950931-41074617
(No clone quality info on bT108A11) 		 
LILRB2 location ⇒ 6:40971116-40971170 CR450381,PigE-108A11,6:40950931-41074617
(No clone quality info on bT108A11) 		 
LILRB2 location ⇒ 6:41034319-41034617 CR450381,PigE-108A11,6:40950931-41074617
(No clone quality info on bT108A11) 		 
LILRB3L1 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
LILRB3L2 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
LILRB3L3 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
LILRB4 location ⇒ 6:40680163-40679875   CU914171,CH242-113P17,6:40677454-40685481
(Clone quality: bE113P17 on chr=6; Num_of_Contigs=7; )
LILRB4 location ⇒ 6:40969622-40969910 CR450381,PigE-108A11,6:40950931-41074617
(No clone quality info on bT108A11) 		 
LILRB4 location ⇒ 6:40970052-40970105 CR450381,PigE-108A11,6:40950931-41074617
(No clone quality info on bT108A11) 		 
LILRB4 location ⇒ 6:40988039-40988327 CR450381,PigE-108A11,6:40950931-41074617
(No clone quality info on bT108A11) 		 
LILRB4L1 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
LILRB5 location ⇒ 6:41033800-41034105 CR450381,PigE-108A11,6:40950931-41074617
(No clone quality info on bT108A11) 		 
LILRB5 location ⇒ 6:41034317-41034617 CR450381,PigE-108A11,6:40950931-41074617
(No clone quality info on bT108A11) 		 
LILRB5 location ⇒ 6:41034853-41035159 CR450381,PigE-108A11,6:40950931-41074617
(No clone quality info on bT108A11) 		 
LILRB5 location ⇒ 6:41035857-41036402 CR450381,PigE-108A11,6:40950931-41074617
(No clone quality info on bT108A11) 		 
LILRB5L1 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
LILRB5L1* location ⇒ 6:12569-12650   FP102308,CH242-96G18,6:8267-26213
(Clone quality: bE96G18 on chr=6; Num_of_Contigs=17; )
LILRB5L1* location ⇒ 6:55524-55609   FP102308,CH242-96G18,6:54763-66373
(Clone quality: bE96G18 on chr=6; Num_of_Contigs=17; )
LILRB5L1* location ⇒ 6:68659-68538   FP102308,CH242-96G18,6:66474-71013
(Clone quality: bE96G18 on chr=6; Num_of_Contigs=17; )
LILRB5L1* location ⇒ 6:77428-77512   FP102308,CH242-96G18,6:74069-84470
(Clone quality: bE96G18 on chr=6; Num_of_Contigs=17; )
LILRB5L2 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
LIM2   ENSSSCG00000003232 6:39408582-39415986   CU694842,CH242-204P3,6:39384038-39444131
(Clone quality: bE204P3 on chr=6; Num_of_Contigs=6; )
LIMA1   ENSSSCG00000015917 15:69280019-69326123    
LIMCH1 ENSSSCG00000008799 8:27538302-27705191    
LIMD1   ENSSSCG00000011313 13:24328250-24329644   CU856104,CH242-334A6,13:24321278-24337216
(Clone quality: bE334A6 on chr=13; Num_of_Contigs=8; )
LIMD2   ENSSSCG00000017291 12:12806315-12807617   CU466402,CH242-435H9,12:12806052-12878653
(Clone quality: bE435H9 on chr=12; Num_of_Contigs=7; )
LIMK2 ENSSSCG00000010025 14:48898094-48923133 CT573044,XX-BE156J14,14:48785782-48970332
(No clone quality info on bE156J14) 		 
LIMS1 ENSSSCG00000008137 3:42878515-42902686   FP102256,CH242-427M21,3:42842583-42946651
(Clone quality: bE427M21 on chr=3; Num_of_Contigs=5; )
LIMS1 location ⇒ 3:42878793-42878604   FP102256,CH242-427M21,3:42842583-42946651
(Clone quality: bE427M21 on chr=3; Num_of_Contigs=5; )
LIMS1 location ⇒ 3:42884735-42884641   FP102256,CH242-427M21,3:42842583-42946651
(Clone quality: bE427M21 on chr=3; Num_of_Contigs=5; )
LIMS1 location ⇒ 3:42885297-42885146   FP102256,CH242-427M21,3:42842583-42946651
(Clone quality: bE427M21 on chr=3; Num_of_Contigs=5; )
LIMS1 location ⇒ 3:42887572-42887424   FP102256,CH242-427M21,3:42842583-42946651
(Clone quality: bE427M21 on chr=3; Num_of_Contigs=5; )
LIMS2   ENSSSCG00000015862 15:55811528-55834551   CU855997,CH242-197O1,15:55804959-55849755
(Clone quality: bE197O1 on chr=15; Num_of_Contigs=4; )
LIN28   ENSSSCG00000003557 6:57524195-57536706   FP236394,CH242-241E3,6:57519085-57543203
(Clone quality: bE241E3 on chr=6; Num_of_Contigs=13; )
LIN28B   ENSSSCG00000004365 1:74634925-74835468    
LIN37   ENSSSCG00000002898 6:30171169-30177062   FP243365,CH242-219O7,6:30147881-30183141
(Clone quality: bE219O7 on chr=6; Num_of_Contigs=6; )
LIN52   ENSSSCG00000002358 7:105396706-105596099    
LIN54   ENSSSCG00000009242 8:116475182-116538563    
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-45

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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