A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 10001 - 10100:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
RNF11   ENSSSCG00000003874 6:114714243-114748187    
RNF114   ENSSSCG00000010630 14:127343683-127344261   CU640882,CH242-131F19,14:127276049-127448750
(Clone quality: bE131F19 on chr=14; Num_of_Contigs=1; )
RNF115 ENSSSCG00000006692 4:103652967-103654138   CU467072,CH242-100P4,4:103582921-103758989
(Clone quality: bE100P4 on chr=4; Num_of_Contigs=2; )
RNF122   ENSSSCG00000015834 15:49351424-49368243   FP102412,CH242-94A16,15:49335344-49377400
(Clone quality: bE94A16 on chr=15; Num_of_Contigs=2; )
RNF123   ENSSSCG00000011387 13:26980256-27010037   CU914539,CH242-222N14,13:26945819-27078203
(Clone quality: bE222N14 on chr=13; Num_of_Contigs=2; )
RNF125 ENSSSCG00000003729 6:80171719-80214020   CU019565,CH242-10N23,6:80107005-80257433
(Clone quality: bE10N23 on chr=6; Num_of_Contigs=3; )
RNF128 ENSSSCG00000012551 X:85163801-85244592    
RNF130 ENSSSCG00000014013 2:67921109-67982365 CU639394,CH242-198P20,2:67907486-68117033
(Clone quality: bE198P20 on chr=2; Num_of_Contigs=3; ) 		 
RNF135   ENSSSCG00000017737 12:40528609-40542126   CU640398,CH242-247F17,12:40511275-40552582
(Clone quality: bE247F17 on chr=12; Num_of_Contigs=3; )
RNF138   ENSSSCG00000003730 6:80240626-80287311    
RNF139   ENSSSCG00000005973 4:14765545-14787050    
RNF14   ENSSSCG00000014394 2:130431354-130451231   FP102264,CH242-59H11,2:130351429-130495395
(Clone quality: bE59H11 on chr=2; Num_of_Contigs=3; )
RNF144A   ENSSSCG00000008646 3:118737656-118886763    
RNF144B   ENSSSCG00000001076 7:14675141-14750767    
RNF145   ENSSSCG00000017043 16:61928586-61983931    
RNF146   ENSSSCG00000004217 1:37518165-37519247   CU856007,CH242-209H2,1:37376899-37520361
(Clone quality: bE209H2 on chr=1; Num_of_Contigs=2; )
RNF149 ENSSSCG00000008168 3:48743628-48762683    
RNF150   ENSSSCG00000009053 8:74130179-74159441    
RNF152   ENSSSCG00000004902 1:166473622-166474230   CU582901,CH242-60C21,1:166458737-166474760
(Clone quality: bE60C21 on chr=1; Num_of_Contigs=9; )
RNF157 ENSSSCG00000017186 12:3584864-3653790    
RNF165   ENSSSCG00000004502 1:100160368-100169355   FP015922,CH242-123E15,1:100135794-100174246
(Clone quality: bE123E15 on chr=1; Num_of_Contigs=7; )
RNF167   ENSSSCG00000017906 12:49161853-49166076   FP015831,CH242-271O18,12:49076321-49169107
(Clone quality: bE271O18 on chr=12; Num_of_Contigs=4; )
RNF168   ENSSSCG00000012183 X:19539505-19540474   CU207412,CH242-477E15,X:19481709-19550329
(Clone quality: bE477E15 on chr=X; Num_of_Contigs=9; )
RNF169   ENSSSCG00000014844 9:8794070-8821474   CU928552,CH242-149C19,9:8793625-8828371
(Clone quality: bE149C19 on chr=9; Num_of_Contigs=6; )
RNF17   ENSSSCG00000009572 11:79542828-79575422   CU928666,CH242-357O8,11:79538144-79577126
(Clone quality: bE357O8 on chr=11; Num_of_Contigs=11; )
RNF180   ENSSSCG00000016941 16:40448530-40682573    
RNF181   ENSSSCG00000008232 3:54049028-54050862   CU928286,CH242-219K12,3:54043219-54085564
(Clone quality: bE219K12 on chr=3; Num_of_Contigs=4; )
RNF182   ENSSSCG00000001058 7:10459627-10460370   CT827871,CH242-258D4,7:10406331-10519128
(Clone quality: bE258D4 on chr=7; Num_of_Contigs=3; )
RNF187   ENSSSCG00000013996 2:66946179-66949552 FP015983,CH242-74L12,2:66907442-67096474
(Clone quality: bE74L12 on chr=2; Num_of_Contigs=3; ) 		 
RNF19A   ENSSSCG00000006066 4:37036762-37071876    
RNF2   ENSSSCG00000015568 9:118615386-118729631    
RNF20   ENSSSCG00000005399 1:254840045-254867407    
RNF207   ENSSSCG00000003368 6:45407326-45416334   FP102454,CH242-79J15,6:45387357-45440384
(Clone quality: bE79J15 on chr=6; Num_of_Contigs=7; )
RNF208   ENSSSCG00000005858 1:294439810-294440604   CU928955,CH242-34I15,1:294431557-294452171
(Clone quality: bE34I15 on chr=1; Num_of_Contigs=4; )
RNF213   ENSSSCG00000017146 12:1061906-1115819    
RNF214   ENSSSCG00000015077 9:43513158-43556330    
RNF215   ENSSSCG00000010005 14:48160497-48166215   CT956025,CH242-69C12,14:48142322-48239134
(Clone quality: bE69C12 on chr=14; Num_of_Contigs=15; )
RNF216   ENSSSCG00000007587 3:3952543-3969567   FP102569,CH242-151E19,3:3887357-3971939
(Clone quality: bE151E19 on chr=3; Num_of_Contigs=3; )
RNF222   ENSSSCG00000017985 12:50620228-50620857   CU672254,CH242-41G13,12:50613728-50681703
(Clone quality: bE41G13 on chr=12; Num_of_Contigs=3; )
RNF24   ENSSSCG00000007141 17:33370314-33394494    
RNF25   ENSSSCG00000016202 15:113891615-113893622   CU914509,CH242-30J4,15:113890521-113893812
(Clone quality: bE30J4 on chr=15; Num_of_Contigs=25; )
RNF26   ENSSSCG00000015117 9:45155745-45157046   CU915638,CH242-115L13,9:45139059-45168315
(Clone quality: bE115L13 on chr=9; Num_of_Contigs=6; )
RNF31   ENSSSCG00000002003 7:81481033-81499734   CT961055,CH242-32K2,7:81442434-81553552
(Clone quality: bE32K2 on chr=7; Num_of_Contigs=2; )
RNF32   ENSSSCG00000016414 18:1142696-1169728    
RNF38   ENSSSCG00000005343 1:248307859-248424441    
RNF39 ENSSSCG00000001244 7:24826735-24831445 CT737425,CH242-47O8,7:24783186-24956885
(Clone quality: bE47O8 on chr=7; Num_of_Contigs=3; ) 		 
RNF4   ENSSSCG00000008690 8:752967-762300   CU640885,CH242-239A2,8:750365-768182
(Clone quality: bE239A2 on chr=8; Num_of_Contigs=14; )
RNF41   ENSSSCG00000000383 5:20521051-20546739   CU694915,CH242-453C18,5:20512361-20554936
(Clone quality: bE453C18 on chr=5; Num_of_Contigs=10; )
RNF43   ENSSSCG00000017640 12:32653791-32668228    
RNF44   ENSSSCG00000014056 2:70391204-70406754 FP101981,CH242-191F5,2:70304317-70501298
(Clone quality: bE191F5 on chr=2; Num_of_Contigs=3; ) 		 
RNF5 ENSSSCG00000001436 7:28054882-28057372 CT954269,CH242-404E7,7:27953077-28153182
(Clone quality: bE404E7 on chr=7; Num_of_Contigs=12; ) 		 
RNF6   ENSSSCG00000009299 11:3165368-3174969   CU633808,CH242-519P8,11:3156619-3186937
(Clone quality: bE519P8 on chr=11; Num_of_Contigs=11; )
RNF7   ENSSSCG00000011674 13:67333892-67340309   CU914638,CH242-182J3,13:67262584-67431184
(Clone quality: bE182J3 on chr=13; Num_of_Contigs=1; )
RNFT1   ENSSSCG00000017671 12:34299118-34311135    
RNFT2   ENSSSCG00000009862 14:35901619-35974348    
RNH1   ENSSSCG00000003313 6:41814425-41815804   FP236123,CH242-107C1,6:41810249-41839566
(Clone quality: bE107C1 on chr=6; Num_of_Contigs=14; )
RNLS   ENSSSCG00000010441 14:105217467-105289830    
RNMTL1   ENSSSCG00000017806 12:44994313-45000453   CU928997,CH242-26C19,12:44982217-45011842
(Clone quality: bE26C19 on chr=12; Num_of_Contigs=2; )
RNPC3 ENSSSCG00000006856 4:120126062-120311261    
RNPEP   ENSSSCG00000010921 10:24364935-24382244    
RNPEPL1   ENSSSCG00000016367 15:131718484-131726665   FP017225,CH242-111J1,15:131713089-131726708
(Clone quality: bE111J1 on chr=15; Num_of_Contigs=7; )
RNPS1   ENSSSCG00000008048 3:36590046-36599027   FP102909,CH242-324F20,3:36589947-36599483
(Clone quality: bE324F20 on chr=3; Num_of_Contigs=11; )
ROBLD3   ENSSSCG00000006499 4:97918370-97922052   CU302298,CH242-261P14,4:97896859-97936068
(Clone quality: bE261P14 on chr=4; Num_of_Contigs=4; )
ROBO1 ENSSSCG00000012001 13:127008298-127144222    
ROBO2 ENSSSCG00000012002 13:127392078-127563809    
ROBO3 ENSSSCG00000015202 9:50523491-50539177   CU656002,CH242-314J3,9:50466714-50627914
(Clone quality: bE314J3 on chr=9; Num_of_Contigs=1; )
ROBO4 ENSSSCG00000015203 9:50542198-50555503   CU656002,CH242-314J3,9:50466714-50627914
(Clone quality: bE314J3 on chr=9; Num_of_Contigs=1; )
ROCK2   ENSSSCG00000008629 3:116237087-116310820    
ROD1   ENSSSCG00000005466 1:265840095-265941368    
ROGDI ENSSSCG00000007932 3:33627260-33633067   CU929765,CH242-314I20,3:33579794-33640862
(Clone quality: bE314I20 on chr=3; Num_of_Contigs=8; )
ROMO1   ENSSSCG00000007308 17:41163506-41165234 CU210870,CH242-280N7,17:41118159-41273708
(Clone quality: bE280N7 on chr=17; Num_of_Contigs=1; ) 		 
ROR1 ENSSSCG00000003811 6:104526425-104666928    
ROR1 ENSSSCG00000004576 1:115002745-115018580   CU571371,CH242-71I23,1:115000742-115100029
(Clone quality: bE71I23 on chr=1; Num_of_Contigs=2; )
ROR2 ENSSSCG00000004576 1:115002745-115018580   CU571371,CH242-71I23,1:115000742-115100029
(Clone quality: bE71I23 on chr=1; Num_of_Contigs=2; )
ROR2 ENSSSCG00000009593 14:3209114-3440040    
RORA ENSSSCG00000004576 1:115002745-115018580   CU571371,CH242-71I23,1:115000742-115100029
(Clone quality: bE71I23 on chr=1; Num_of_Contigs=2; )
RORB   ENSSSCG00000005268 1:238183943-238249133    
RP1   ENSSSCG00000006255 4:79601673-79611644   CU179720,CH242-211K20,4:79522771-79618562
(Clone quality: bE211K20 on chr=4; Num_of_Contigs=2; )
RP2 ENSSSCG00000002861 6:28549611-28558497    
RP2 ENSSSCG00000006892 4:127690915-127704329   CU582963,CH242-133N10,4:127667298-127798755
(Clone quality: bE133N10 on chr=4; Num_of_Contigs=2; )
RP2 ENSSSCG00000008160 3:47646110-47670156   CU929680,CH242-116J7,3:47645559-47673106
(Clone quality: bE116J7 on chr=3; Num_of_Contigs=4; )
RP2 ENSSSCG00000010634 14:128418173-128655869    
RP2 ENSSSCG00000014851 9:9179857-9211105   CU655994,CH242-280C8,9:9168027-9211748
(Clone quality: bE280C8 on chr=9; Num_of_Contigs=8; )
RPA1 ENSSSCG00000008226 3:53578822-53658397   CU570839,CH242-286N20,3:53540211-53717808
(Clone quality: bE286N20 on chr=3; Num_of_Contigs=1; )
RPA1 ENSSSCG00000017822 12:45446532-45485050   CU914290,CH242-53A19,12:45441876-45568865
(Clone quality: bE53A19 on chr=12; Num_of_Contigs=6; )
RPA2   ENSSSCG00000003583 6:58564508-58577788   CU928393,CH242-274K17,6:58557338-58588041
(Clone quality: bE274K17 on chr=6; Num_of_Contigs=5; )
RPAP1   ENSSSCG00000004745 1:136249712-136267202   CU633572,CH242-274F1,1:136202998-136286247
(Clone quality: bE274F1 on chr=1; Num_of_Contigs=12; )
RPAP3   ENSSSCG00000000813 5:73514369-73597172    
RPE65   ENSSSCG00000003794 6:101668104-101688622   CU929726,CH242-22F14,6:101656130-101836468
(Clone quality: bE22F14 on chr=6; Num_of_Contigs=1; )
RPGR   ENSSSCG00000012235 X:33691105-33745516    
RPGRIP1L   ENSSSCG00000002833 6:21957507-21962762   CU929599,CH242-240L15,6:21775601-21963374
(Clone quality: bE240L15 on chr=6; Num_of_Contigs=1; )
RPH3A   ENSSSCG00000009883 14:39211622-39275982    
RPIA   ENSSSCG00000008207 3:52429048-52459313   CU694848,CH242-221I5,3:52408559-52460472
(Clone quality: bE221I5 on chr=3; Num_of_Contigs=4; )
RPL10L   ENSSSCG00000005001 1:185268691-185269335   CU041312,CH242-393M19,1:185231080-185303343
(Clone quality: bE393M19 on chr=1; Num_of_Contigs=5; )
RPL18A   ENSSSCG00000013889 2:62114183-62117628   CU463003,CH242-317A24,2:62084905-62151709
(Clone quality: bE317A24 on chr=2; Num_of_Contigs=2; )
RPL19   ENSSSCG00000015408 9:94207224-94207812   CU694649,CH242-92C16,9:94197879-94306673
(Clone quality: bE92C16 on chr=9; Num_of_Contigs=5; )
RPL21   ENSSSCG00000009303 11:3806315-3810805    
RPL22L1   ENSSSCG00000006770 4:111951920-111952279   CU463248,CH242-400P6,4:111906000-111962256
(Clone quality: bE400P6 on chr=4; Num_of_Contigs=4; )
RPL24 ENSSSCG00000004613 1:121344824-121360709    
RPL24 ENSSSCG00000011952 13:115580960-115587885   CU633680,CH242-251F9,13:115560062-115745735
(Clone quality: bE251F9 on chr=13; Num_of_Contigs=2; )
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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