A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 11001 - 11100:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
SLPI ENSSSCG00000007394 17:49485071-49487656   CU606979,CH242-291J7,17:49482658-49489853
(Clone quality: bE291J7 on chr=17; Num_of_Contigs=31; )
SLU7   ENSSSCG00000017033 16:60585639-60726327    
SMAD1 ENSSSCG00000009040 8:71566227-71612707    
SMAD1 ENSSSCG00000016677 18:40739502-40779080    
SMAD2 ENSSSCG00000004505 1:101093768-101104311   CU062588,CH242-5J4,1:101076578-101106690
(Clone quality: bE5J4 on chr=1; Num_of_Contigs=16; )
SMAD3 ENSSSCG00000004952 1:172341003-172364322    
SMAD4 ENSSSCG00000004524 1:103812352-103866422    
SMAD5 ENSSSCG00000014319 2:125760025-125790324   FP102024,CH242-162I22,2:125759713-125801286
(Clone quality: bE162I22 on chr=2; Num_of_Contigs=10; )
SMAD6 ENSSSCG00000004948 1:171829965-171907925    
SMAD7 ENSSSCG00000004507 1:101672864-101700903   CU062441,CH242-143B15,1:101658147-101702023
(Clone quality: bE143B15 on chr=1; Num_of_Contigs=3; )
SMAD9   ENSSSCG00000009357 11:12164136-12268651    
SMAGP   ENSSSCG00000000224 5:15383458-15403175   CU694837,CH242-191H6,5:15374884-15408249
(Clone quality: bE191H6 on chr=5; Num_of_Contigs=5; )
SMAP1   ENSSSCG00000004276 1:53243221-53352644    
SMAP2   ENSSSCG00000003983 6:122137451-122186147   CU694583,CH242-250P22,6:122065497-122229785
(Clone quality: bE250P22 on chr=6; Num_of_Contigs=1; )
SMARCA1   ENSSSCG00000012649 X:104198947-104274523   CU695129,CH242-218P14,X:104175406-104287701
(Clone quality: bE218P14 on chr=X; Num_of_Contigs=6; )
SMARCA2   ENSSSCG00000005232 1:229848236-230024688    
SMARCA4 ENSSSCG00000013629 2:52483857-52573498    
SMARCA5   ENSSSCG00000009047 8:72649551-72688655    
SMARCAD1   ENSSSCG00000009193 8:107465930-107591273    
SMARCB1   ENSSSCG00000010070 14:50889446-50920532    
SMARCC1   ENSSSCG00000011340 13:25404412-25599338    
SMARCC2   ENSSSCG00000000382 5:20482739-20502648   CU694915,CH242-453C18,5:20460687-20504457
(Clone quality: bE453C18 on chr=5; Num_of_Contigs=10; )
SMARCD1   ENSSSCG00000000215 5:14634315-14684388    
SMARCD2   ENSSSCG00000017286 12:12665578-12674428    
SMARCD3   ENSSSCG00000016435 18:5044751-5054049    
SMARCE1   ENSSSCG00000017468 12:19608048-19621464   CU856162,CH242-340B15,12:19607891-19623524
(Clone quality: bE340B15 on chr=12; Num_of_Contigs=24; )
SMC1A   ENSSSCG00000012325 X:45583024-45620710    
SMC3   ENSSSCG00000010625 14:126576623-126615913    
SMC4   ENSSSCG00000011731 13:78782572-78821617   CU466375,CH242-17F2,13:78718958-78854255
(Clone quality: bE17F2 on chr=13; Num_of_Contigs=7; )
SMC5   ENSSSCG00000005255 1:234143853-234162624   CU074416,CH242-91G16,1:234077167-234163653
(Clone quality: bE91G16 on chr=1; Num_of_Contigs=6; )
SMC6   ENSSSCG00000008614 3:111476924-111549253    
SMCP   ENSSSCG00000006594 4:100489890-100537402   CU210949,CH242-471G17,4:100442582-100566951
(Clone quality: bE471G17 on chr=4; Num_of_Contigs=4; )
SMCR7L   ENSSSCG00000000085 5:5070632-5081602   CU424445,CH242-128A11,5:5029969-5093393
(Clone quality: bE128A11 on chr=5; Num_of_Contigs=8; )
SMEK1   ENSSSCG00000002441 7:120955676-120990699   CU302426,CH242-45H24,7:120893357-121059688
(Clone quality: bE45H24 on chr=7; Num_of_Contigs=2; )
SMG5   ENSSSCG00000006490 4:97674150-97704637   CU468654,CH242-228K10,4:97649767-97712830
(Clone quality: bE228K10 on chr=4; Num_of_Contigs=7; )
SMG6   ENSSSCG00000017826 12:45610780-45836519    
SMG7   ENSSSCG00000015558 9:117064539-117103942    
SMNDC1   ENSSSCG00000010623 14:126332835-126343680   CT737363,CH242-181F23,14:126304259-126433090
(Clone quality: bE181F23 on chr=14; Num_of_Contigs=4; )
SMO   ENSSSCG00000016569 18:17609463-17636344   CU638846,CH242-272C14,18:17604734-17699485
(Clone quality: bE272C14 on chr=18; Num_of_Contigs=4; )
SMOC1   ENSSSCG00000002314 7:101933488-102011490   CT943645,CH242-235L8,7:101928117-102040051
(Clone quality: bE235L8 on chr=7; Num_of_Contigs=2; )
SMOC2   ENSSSCG00000004013 1:1240205-1711059    
SMOX   ENSSSCG00000007140 17:33110927-33143047    
SMPD1   ENSSSCG00000014627 9:2612617-2614989   CU972372,CH242-47M8,9:2612491-2620938
(Clone quality: bE47M8 on chr=9; Num_of_Contigs=7; )
SMPD2   ENSSSCG00000004408 1:80365494-80481222    
SMPD3   ENSSSCG00000002764 6:12579098-12590292   CU462933,CH242-310F10,6:12564924-12617393
(Clone quality: bE310F10 on chr=6; Num_of_Contigs=6; )
SMPDL3A ENSSSCG00000004233 1:41352453-41370661    
SMPDL3B   ENSSSCG00000003582 6:58525746-58549905   CU928393,CH242-274K17,6:58465404-58557237
(Clone quality: bE274K17 on chr=6; Num_of_Contigs=5; )
SMS ENSSSCG00000011808 13:94724975-94726408   CU466378,CH242-185B2,13:94693645-94764313
(Clone quality: bE185B2 on chr=13; Num_of_Contigs=3; )
SMS ENSSSCG00000012166 X:16864438-16893797 CU210923,CH242-498A9,X:16850786-17046971
(Clone quality: bE498A9 on chr=X; Num_of_Contigs=1; ) 		 
SMS1 ENSSSCG00000010433 14:103817282-103909542    
SMTN   ENSSSCG00000010017 14:48687103-48788249    
SMTNL2   ENSSSCG00000017885 12:47829913-47849624   CU655858,CH242-208J3,12:47772347-47942311
(Clone quality: bE208J3 on chr=12; Num_of_Contigs=1; )
SMU1   ENSSSCG00000010999 10:31921639-31948532    
SMURF1   ENSSSCG00000007608 3:5325538-5404998    
SMYD1   ENSSSCG00000008215 3:52781440-52800380   CU856068,CH242-8G4,3:52762593-52803648
(Clone quality: bE8G4 on chr=3; Num_of_Contigs=15; )
SMYD2   ENSSSCG00000015583 9:121753523-121806995   CU929811,CH242-470E24,9:121749276-121811631
(Clone quality: bE470E24 on chr=9; Num_of_Contigs=2; )
SMYD3   ENSSSCG00000010880 10:18518392-18523729   CU466969,CH242-424N17,10:18508892-18527791
(Clone quality: bE424N17 on chr=10; Num_of_Contigs=7; )
SMYD4   ENSSSCG00000017819 12:45376926-45403142    
SMYD5   ENSSSCG00000008305 3:63914359-63926774   FP089556,CH242-274G10,3:63904593-63934044
(Clone quality: bE274G10 on chr=3; Num_of_Contigs=6; )
SNAP23   ENSSSCG00000004727 1:135149948-135188452   CU929677,CH242-104I21,1:135136760-135189683
(Clone quality: bE104I21 on chr=1; Num_of_Contigs=5; )
SNAP29   ENSSSCG00000010094 14:51588223-51603171   CU633934,CH242-117H20,14:51553625-51738341
(Clone quality: bE117H20 on chr=14; Num_of_Contigs=1; )
SNAP47   ENSSSCG00000013984 2:66179919-66266917    
SNAP91 ENSSSCG00000004453 1:86807843-86917184   CU407112,CH242-322O1,1:86776107-86939727
(Clone quality: bE322O1 on chr=1; Num_of_Contigs=4; )
SNAPC1 ENSSSCG00000005097 1:199839545-199866029    
SNAPC2   ENSSSCG00000013589 2:51291895-51294543   CU929699,CH242-182L23,2:51289316-51437705
(Clone quality: bE182L23 on chr=2; Num_of_Contigs=2; )
SNAPC3   ENSSSCG00000005184 1:216382649-216544340    
SNAPC5   ENSSSCG00000004944 1:171628672-171632256   CU407297,CH242-524I5,1:171627733-171632288
(Clone quality: bE524I5 on chr=1; Num_of_Contigs=20; )
SNCA ENSSSCG00000009203 8:111089417-111113328    
SNCAIP   ENSSSCG00000014235 2:113873708-113931640    
SNCB   ENSSSCG00000014053 2:70306575-70316626 FP101981,CH242-191F5,2:70304317-70501298
(Clone quality: bE191F5 on chr=2; Num_of_Contigs=3; ) 		 
SND1   ENSSSCG00000016590 18:18475789-18778644    
SNED1   ENSSSCG00000016381 15:132142482-132180843    
SNN   ENSSSCG00000007897 3:28129411-28129674   FP089564,CH242-85K23,3:28125996-28132743
(Clone quality: bE85K23 on chr=3; Num_of_Contigs=5; )
snoR38   ENSSSCG00000019228 12:3273466-3273548   CU928356,CH242-33I18,12:3269827-3274400
(Clone quality: bE33I18 on chr=12; Num_of_Contigs=10; )
snoR38   ENSSSCG00000019245 12:3271777-3271854   CU928356,CH242-33I18,12:3269827-3274400
(Clone quality: bE33I18 on chr=12; Num_of_Contigs=10; )
snoR38   ENSSSCG00000019428 12:3274049-3274120   CU928356,CH242-33I18,12:3269827-3274400
(Clone quality: bE33I18 on chr=12; Num_of_Contigs=10; )
SNORA11   ENSSSCG00000018121 12:22684979-22685108   CU928816,CH242-243D3,12:22676597-22697158
(Clone quality: bE243D3 on chr=12; Num_of_Contigs=4; )
SNORA11   ENSSSCG00000018148 5:78529023-78529139   CU856024,CH242-269P23,5:78524189-78529875
(Clone quality: bE269P23 on chr=5; Num_of_Contigs=12; )
SNORA11   ENSSSCG00000018149 12:36214783-36214910   CU694727,CH242-39G9,12:36193404-36216214
(Clone quality: bE39G9 on chr=12; Num_of_Contigs=15; )
SNORA11   ENSSSCG00000018191 7:120405570-120405697   CU468883,CH242-64J18,7:120405220-120417949
(Clone quality: bE64J18 on chr=7; Num_of_Contigs=16; )
SNORA11   ENSSSCG00000018305 X:44855215-44855343   CU639446,CH242-176C9,X:44847759-44857045
(Clone quality: bE176C9 on chr=X; Num_of_Contigs=6; )
SNORA11   ENSSSCG00000018322 7:20257271-20257399   CT737347,CH242-196L6,7:20166720-20328348
(Clone quality: bE196L6 on chr=7; Num_of_Contigs=1; )
SNORA11   ENSSSCG00000018326 X:47251784-47251911   FP091239,CH242-6G17,X:47236645-47316523
(Clone quality: bE6G17 on chr=X; Num_of_Contigs=4; )
SNORA11   ENSSSCG00000018335 12:35966771-35966898   CU928931,CH242-30N5,12:35944333-35994099
(Clone quality: bE30N5 on chr=12; Num_of_Contigs=5; )
SNORA11   ENSSSCG00000018786 7:81099289-81099403   CT997804,CH242-280B15,7:81065282-81125246
(Clone quality: bE280B15 on chr=7; Num_of_Contigs=5; )
SNORA11   ENSSSCG00000018858 4:101655307-101655435 CU457723,CH242-28L6,4:101441264-101656496
(Clone quality: bE28L6 on chr=4; Num_of_Contigs=25; ) 		 
SNORA11   ENSSSCG00000019051 8:40005225-40005349   CU915394,CH242-249F8,8:39991954-40010500
(Clone quality: bE249F8 on chr=8; Num_of_Contigs=5; )
SNORA11   ENSSSCG00000019469 X:47456207-47456335   CU856438,CH242-133L21,X:47452437-47526061
(Clone quality: bE133L21 on chr=X; Num_of_Contigs=8; )
SNORA11   ENSSSCG00000019781 8:6243565-6243694   CU861522,CH242-143J20,8:6154772-6327389
(Clone quality: bE143J20 on chr=8; Num_of_Contigs=1; )
SNORA11   ENSSSCG00000019814 17:55306220-55306354 CR974579,CH242-209L2,17:55296227-55366821
(No clone quality info on bE209L2) 		 
SNORA11   ENSSSCG00000019930 12:49636460-49636589   CU914703,CH242-254H21,12:49603939-49653295
(Clone quality: bE254H21 on chr=12; Num_of_Contigs=9; )
SNORA11   ENSSSCG00000019988 X:47379506-47379634   CU928851,CH242-119O9,X:47360054-47409767
(Clone quality: bE119O9 on chr=X; Num_of_Contigs=9; )
SNORA12   ENSSSCG00000018383 14:116227675-116227820   CT827831,CH242-224L12,14:116210864-116263223
(Clone quality: bE224L12 on chr=14; Num_of_Contigs=2; )
SNORA12   ENSSSCG00000018651 X:19620398-19620541   CU207412,CH242-477E15,X:19616646-19644470
(Clone quality: bE477E15 on chr=X; Num_of_Contigs=9; )
SNORA13   ENSSSCG00000019323 2:106338175-106338309   CU462932,CH242-307O18,2:106335520-106508632
(Clone quality: bE307O18 on chr=2; Num_of_Contigs=1; )
SNORA14   ENSSSCG00000018243 14:57318299-57318433   CU407042,CH242-201M6,14:57298971-57336346
(Clone quality: bE201M6 on chr=14; Num_of_Contigs=3; )
SNORA14   ENSSSCG00000019338 4:42029505-42029639   CU467033,CH242-55N4,4:42029344-42037750
(Clone quality: bE55N4 on chr=4; Num_of_Contigs=10; )
SNORA15   ENSSSCG00000018282 3:15384675-15384816   FP102600,CH242-175H12,3:15384203-15404341
(Clone quality: bE175H12 on chr=3; Num_of_Contigs=9; )
SNORA15   ENSSSCG00000018488 3:15359654-15359795   FP102627,CH242-216K18,3:15358721-15365142
(Clone quality: bE216K18 on chr=3; Num_of_Contigs=6; )
SNORA17   ENSSSCG00000018620 1:294205870-294206000   FP236151,CH242-517G10,1:294180904-294209678
(Clone quality: bE517G10 on chr=1; Num_of_Contigs=14; )
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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