A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 20901 - 21000:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
PLOD1 location ⇒ 6:48870541-48870709   CU695168,CH242-2E14,6:48812011-48903740
(Clone quality: bE2E14 on chr=6; Num_of_Contigs=4; )
PLOD1 location ⇒ 6:48890867-48891154   CU695168,CH242-2E14,6:48812011-48903740
(Clone quality: bE2E14 on chr=6; Num_of_Contigs=4; )
PLOD1 location ⇒ 6:48997118-48996950   FP102316,CH242-204J17,6:48990044-48999695
(Clone quality: bE204J17 on chr=6; Num_of_Contigs=9; )
PLOD1 location ⇒ 6:49040360-49040647   FP102316,CH242-204J17,6:49035778-49047016
(Clone quality: bE204J17 on chr=6; Num_of_Contigs=9; )
PLP location ⇒ X:82365594-82365782   FP015842,CH242-149K17,X:82322663-82377772
(Clone quality: bE149K17 on chr=X; Num_of_Contigs=5; )
PLP location ⇒ X:82366456-82366717   FP015842,CH242-149K17,X:82322663-82377772
(Clone quality: bE149K17 on chr=X; Num_of_Contigs=5; )
PLP location ⇒ X:82367793-82367966   FP015842,CH242-149K17,X:82322663-82377772
(Clone quality: bE149K17 on chr=X; Num_of_Contigs=5; )
PLP location ⇒ X:82371915-82372481   FP015842,CH242-149K17,X:82322663-82377772
(Clone quality: bE149K17 on chr=X; Num_of_Contigs=5; )
PLP2 location ⇒ X:42696926-42696530   FP067404,CH242-247J8,X:42680766-42706990
(Clone quality: bE247J8 on chr=X; Num_of_Contigs=5; )
PLP2 location ⇒ X:42697874-42697776   FP067404,CH242-247J8,X:42680766-42706990
(Clone quality: bE247J8 on chr=X; Num_of_Contigs=5; )
PLP2 location ⇒ X:42698121-42697968   FP067404,CH242-247J8,X:42680766-42706990
(Clone quality: bE247J8 on chr=X; Num_of_Contigs=5; )
PLP2 location ⇒ X:42699405-42699208   FP067404,CH242-247J8,X:42680766-42706990
(Clone quality: bE247J8 on chr=X; Num_of_Contigs=5; )
PLSCR4 location ⇒ 13:70669460-70669550   CU855852,CH242-90H6,13:70661837-70722848
(Clone quality: bE90H6 on chr=13; Num_of_Contigs=3; )
PLSCR4 location ⇒ 13:70670342-70670503   CU855852,CH242-90H6,13:70661837-70722848
(Clone quality: bE90H6 on chr=13; Num_of_Contigs=3; )
PLSCR4 location ⇒ 13:70671890-70672055   CU855852,CH242-90H6,13:70661837-70722848
(Clone quality: bE90H6 on chr=13; Num_of_Contigs=3; )
PLSCR4 location ⇒ 13:70673596-70673703   CU855852,CH242-90H6,13:70661837-70722848
(Clone quality: bE90H6 on chr=13; Num_of_Contigs=3; )
PLTP location ⇒ 13:18154699-18156191   CU856332,CH242-416J21,13:18153113-18162056
(Clone quality: bE416J21 on chr=13; Num_of_Contigs=14; )
PLUNC location ⇒ 17:38676341-38676485   CU467098,CH242-181C3,17:38585383-38773516
(Clone quality: bE181C3 on chr=17; Num_of_Contigs=1; )
PLUNC location ⇒ 17:38676659-38676818   CU467098,CH242-181C3,17:38585383-38773516
(Clone quality: bE181C3 on chr=17; Num_of_Contigs=1; )
PLUNC location ⇒ 17:38678234-38678343   CU467098,CH242-181C3,17:38585383-38773516
(Clone quality: bE181C3 on chr=17; Num_of_Contigs=1; )
PLUNC location ⇒ 17:38678932-38679081   CU467098,CH242-181C3,17:38585383-38773516
(Clone quality: bE181C3 on chr=17; Num_of_Contigs=1; )
PLXNB1 location ⇒ 13:25932651-25932824   FP102065,CH242-145E9,13:25919129-25944766
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
PLXNB1 location ⇒ 13:25932980-25933142   FP102065,CH242-145E9,13:25919129-25944766
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
PLXNB1 location ⇒ 13:25933222-25933374   FP102065,CH242-145E9,13:25919129-25944766
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
PLXNB1 location ⇒ 13:25937575-25938328   FP102065,CH242-145E9,13:25919129-25944766
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
PLXNC1 location ⇒ 5:83803563-83804518   FP245493,CH242-228L4,5:83803193-83805996
(Clone quality: bE228L4 on chr=5; Num_of_Contigs=7; )
PLXNC1 location ⇒ 5:83903802-83903866   FP245493,CH242-228L4,5:83897461-83906441
(Clone quality: bE228L4 on chr=5; Num_of_Contigs=7; )
PLXNC1 location ⇒ 5:83913726-83913830   FP245493,CH242-228L4,5:83906542-83915403
(Clone quality: bE228L4 on chr=5; Num_of_Contigs=7; )
PLXNC1 location ⇒ 5:83935395-83935598   FP245493,CH242-228L4,5:83933585-83940288
(Clone quality: bE228L4 on chr=5; Num_of_Contigs=7; )
PMAIP1 location ⇒ 1:167846904-167847139   CU855866,CH242-18C13,1:167831711-167849989
(Clone quality: bE18C13 on chr=1; Num_of_Contigs=11; )
PMAIP1 location ⇒ 1:167850090-167850629    
PMAIP1 location ⇒ 1:168066423-168065644   CU633494,CH242-198F23,1:168026905-168104475
(Clone quality: bE198F23 on chr=1; Num_of_Contigs=5; )
PMAIP1 location ⇒ 1:168069259-168069024   CU633494,CH242-198F23,1:168026905-168104475
(Clone quality: bE198F23 on chr=1; Num_of_Contigs=5; )
PMCH location ⇒ 5:77325168-77325429   CU457436,CH242-54N2,5:77321248-77325842
(Clone quality: bE54N2 on chr=5; Num_of_Contigs=8; )
PML location ⇒ 7:64855483-64855317   CU468908,CH242-516A11,7:64852332-64870340
(Clone quality: bE516A11 on chr=7; Num_of_Contigs=3; )
PML location ⇒ 7:64874669-64874210   CU468908,CH242-516A11,7:64870441-64902976
(Clone quality: bE516A11 on chr=7; Num_of_Contigs=3; )
PML location ⇒ 7:64876558-64876502   CU468908,CH242-516A11,7:64870441-64902976
(Clone quality: bE516A11 on chr=7; Num_of_Contigs=3; )
PNN location ⇒ 1:177450407-177449014   CU639454,CH242-168O7,1:177425380-177461060
(Clone quality: bE168O7 on chr=1; Num_of_Contigs=4; )
PNN location ⇒ 1:177454759-177454689   CU639454,CH242-168O7,1:177425380-177461060
(Clone quality: bE168O7 on chr=1; Num_of_Contigs=4; )
PNN location ⇒ 1:177653226-177653296   FP067374,CH242-259E12,1:177602688-177664256
(Clone quality: bE259E12 on chr=1; Num_of_Contigs=2; )
PNN location ⇒ 1:177657578-177658975   FP067374,CH242-259E12,1:177602688-177664256
(Clone quality: bE259E12 on chr=1; Num_of_Contigs=2; )
PNOC location ⇒ 14:12097654-12097810   CT737320,CH242-198J10,14:11977333-12124098
(Clone quality: bE198J10 on chr=14; Num_of_Contigs=2; )
PNOC location ⇒ 14:12112879-12113339   CT737320,CH242-198J10,14:11977333-12124098
(Clone quality: bE198J10 on chr=14; Num_of_Contigs=2; )
PNOC location ⇒ 14:12116814-12116891   CT737320,CH242-198J10,14:11977333-12124098
(Clone quality: bE198J10 on chr=14; Num_of_Contigs=2; )
POLG location ⇒ 7:60290183-60289697   CT943647,CH242-241C8,7:60283200-60330098
(Clone quality: bE241C8 on chr=7; Num_of_Contigs=2; )
POLG location ⇒ 7:60296596-60296513   CT943647,CH242-241C8,7:60283200-60330098
(Clone quality: bE241C8 on chr=7; Num_of_Contigs=2; )
POLG location ⇒ 7:60306166-60305692   CT943647,CH242-241C8,7:60283200-60330098
(Clone quality: bE241C8 on chr=7; Num_of_Contigs=2; )
POLG location ⇒ 7:60306463-60306193   CT943647,CH242-241C8,7:60283200-60330098
(Clone quality: bE241C8 on chr=7; Num_of_Contigs=2; )
POMC location ⇒ 10:19343720-19344092   CU914747,CH242-234B16,10:19339812-19348080
(Clone quality: bE234B16 on chr=10; Num_of_Contigs=16; )
POMC location ⇒ 10:19531656-19532028   CU633258,CH242-25B9,10:19511594-19619424
(Clone quality: bE25B9 on chr=10; Num_of_Contigs=2; )
POMC location ⇒ 10:19813824-19813945   FP102007,CH242-371A22,10:19715077-19885602
(Clone quality: bE371A22 on chr=10; Num_of_Contigs=1; )
POMC location ⇒ 10:19814016-19814388   FP102007,CH242-371A22,10:19715077-19885602
(Clone quality: bE371A22 on chr=10; Num_of_Contigs=1; )
POMP location ⇒ 11:5548205-5548599   CU062557,CH242-35O20,11:5547880-5553438
(Clone quality: bE35O20 on chr=11; Num_of_Contigs=14; )
POMP location ⇒ 11:5559022-5558924   CU062557,CH242-35O20,11:5556311-5560052
(Clone quality: bE35O20 on chr=11; Num_of_Contigs=14; )
POMP location ⇒ 11:5562423-5562359   CU062557,CH242-35O20,11:5560153-5571380
(Clone quality: bE35O20 on chr=11; Num_of_Contigs=14; )
POSTN location ⇒ 11:12850549-12850157 CT476832,XX-BE284E13,11:12812461-12993238
(No clone quality info on bE284E13)
 
POSTN location ⇒ 11:12866003-12865869 CT476832,XX-BE284E13,11:12812461-12993238
(No clone quality info on bE284E13)
 
POSTN location ⇒ 11:12867595-12867459 CT476832,XX-BE284E13,11:12812461-12993238
(No clone quality info on bE284E13)
 
POSTN location ⇒ 11:12868933-12868783 CT476832,XX-BE284E13,11:12812461-12993238
(No clone quality info on bE284E13)
 
POU1F1 location ⇒ 13:123180714-123180977   CU633644,CH242-171D11,13:123151316-123247028
(Clone quality: bE171D11 on chr=13; Num_of_Contigs=4; )
POU1F1 location ⇒ 13:123192179-123192393   CU633644,CH242-171D11,13:123151316-123247028
(Clone quality: bE171D11 on chr=13; Num_of_Contigs=4; )
POU1F1 location ⇒ 13:123195243-123195299   CU633644,CH242-171D11,13:123151316-123247028
(Clone quality: bE171D11 on chr=13; Num_of_Contigs=4; )
POU1F1 location ⇒ 13:123196100-123196331   CU633644,CH242-171D11,13:123151316-123247028
(Clone quality: bE171D11 on chr=13; Num_of_Contigs=4; )
POU2AF1 location ⇒ 9:117125583-117125644   CU570827,CH242-238C10,9:117082384-117181431
(Clone quality: bE238C10 on chr=9; Num_of_Contigs=5; )
POU2AF1 location ⇒ 9:37982654-37982388   CU856590,CH242-307A12,9:37981605-37996929
(Clone quality: bE307A12 on chr=9; Num_of_Contigs=14; )
POU2AF1 location ⇒ 9:37983381-37983248   CU856590,CH242-307A12,9:37981605-37996929
(Clone quality: bE307A12 on chr=9; Num_of_Contigs=14; )
POU2AF1 location ⇒ 9:38156842-38157303   CU856590,CH242-307A12,9:38155206-38161162
(Clone quality: bE307A12 on chr=9; Num_of_Contigs=14; )
POU2F1 location ⇒ 4:86901904-86901348 CU151848,CH242-192N14,4:86700413-86905931
(Clone quality: bE192N14 on chr=4; Num_of_Contigs=2; )
 
POU2F1 location ⇒ 4:86905291-86904943 CU151848,CH242-192N14,4:86700413-86905931
(Clone quality: bE192N14 on chr=4; Num_of_Contigs=2; )
 
POU2F1 location ⇒ 4:86925938-86925755   CU393593,CH242-337J23,4:86905932-87049355
(Clone quality: bE337J23 on chr=4; Num_of_Contigs=1; )
POU2F1 location ⇒ 4:86945554-86945364   CU393593,CH242-337J23,4:86905932-87049355
(Clone quality: bE337J23 on chr=4; Num_of_Contigs=1; )
POU2F2 location ⇒ 6:34562902-34562822   FP102936,CH242-6G6,6:34562312-34565382
(Clone quality: bE6G6 on chr=6; Num_of_Contigs=31; )
POU2F2 location ⇒ 6:34563026-34562944   FP102936,CH242-6G6,6:34562312-34565382
(Clone quality: bE6G6 on chr=6; Num_of_Contigs=31; )
POU2F2 location ⇒ 6:63603218-63603161 CR956424,PigE-234J24,6:63579214-63695944
(No clone quality info on bT234J24)
 
POU2F2 location ⇒ 6:63709641-63709698   FP102603,CH242-181G10,6:63708865-63716089
(Clone quality: bE181G10 on chr=6; Num_of_Contigs=12; )
POU3F1 location ⇒ 6:63601454-63601567 CR956424,PigE-234J24,6:63579214-63695944
(No clone quality info on bT234J24)
 
POU3F1 location ⇒ 6:63601622-63602074 CR956424,PigE-234J24,6:63579214-63695944
(No clone quality info on bT234J24)
 
POU3F1 location ⇒ 6:63711236-63710784   FP102603,CH242-181G10,6:63708865-63716089
(Clone quality: bE181G10 on chr=6; Num_of_Contigs=12; )
POU3F1 location ⇒ 6:63711404-63711291   FP102603,CH242-181G10,6:63708865-63716089
(Clone quality: bE181G10 on chr=6; Num_of_Contigs=12; )
POU3F3 location ⇒ 1:69227813-69227741   CU210878,CH242-212K4,1:69227011-69237774
(Clone quality: bE212K4 on chr=1; Num_of_Contigs=4; )
POU3F3 location ⇒ 1:69228609-69227927   CU210878,CH242-212K4,1:69227011-69237774
(Clone quality: bE212K4 on chr=1; Num_of_Contigs=4; )
PPA1 location ⇒ 14:76072734-76072676   CU468481,CH242-304F15,14:76046170-76093978
(Clone quality: bE304F15 on chr=14; Num_of_Contigs=5; )
PPA1 location ⇒ 14:76074497-76074427   CU468481,CH242-304F15,14:76046170-76093978
(Clone quality: bE304F15 on chr=14; Num_of_Contigs=5; )
PPA1 location ⇒ 14:76089609-76089488   CU468481,CH242-304F15,14:76046170-76093978
(Clone quality: bE304F15 on chr=14; Num_of_Contigs=5; )
PPA1 location ⇒ 14:76091565-76091510   CU468481,CH242-304F15,14:76046170-76093978
(Clone quality: bE304F15 on chr=14; Num_of_Contigs=5; )
PPARA location ⇒ 5:142630-142390   FP016092,CH242-185O3,5:122470-146185
(Clone quality: bE185O3 on chr=5; Num_of_Contigs=8; )
PPARA location ⇒ 5:145448-145001   FP016092,CH242-185O3,5:122470-146185
(Clone quality: bE185O3 on chr=5; Num_of_Contigs=8; )
PPARA location ⇒ 5:150028-149838   FP016092,CH242-185O3,5:146286-160061
(Clone quality: bE185O3 on chr=5; Num_of_Contigs=8; )
PPARA location ⇒ 5:152763-152664   FP016092,CH242-185O3,5:146286-160061
(Clone quality: bE185O3 on chr=5; Num_of_Contigs=8; )
PPARBP location ⇒ 12:20802517-20802732   FP236573,CH242-65A8,12:20790156-20809394
(Clone quality: bE65A8 on chr=12; Num_of_Contigs=3; )
PPARBP location ⇒ 12:20833055-20833837    
PPARBP location ⇒ 12:20874033-20874248   CU942400,CH242-320P18,12:20873440-20885634
(Clone quality: bE320P18 on chr=12; Num_of_Contigs=18; )
PPARBP location ⇒ 12:20904520-20905419   CU942400,CH242-320P18,12:20885735-20908189
(Clone quality: bE320P18 on chr=12; Num_of_Contigs=18; )
PPARD location ⇒ 7:35809766-35810217   CU571051,CH242-525J6,7:35801913-35828071
(Clone quality: bE525J6 on chr=7; Num_of_Contigs=14; )
PPARD location ⇒ 7:35810742-35811130   CU571051,CH242-525J6,7:35801913-35828071
(Clone quality: bE525J6 on chr=7; Num_of_Contigs=14; )
PPARD location ⇒ 7:35879913-35880364   CU467978,CH242-397F5,7:35872400-35952461
(Clone quality: bE397F5 on chr=7; Num_of_Contigs=4; )
PPARD location ⇒ 7:36024388-36024839   CU424481,CH242-125B19,7:36018736-36025906
(Clone quality: bE125B19 on chr=7; Num_of_Contigs=28; )
PPARG location ⇒ 13:56809178-56809409   CU915692,CH242-255I14,13:56721460-56821905
(Clone quality: bE255I14 on chr=13; Num_of_Contigs=3; )
PPARG location ⇒ 13:56841526-56841976   CU856559,CH242-162G3,13:56821906-56932064
(Clone quality: bE162G3 on chr=13; Num_of_Contigs=2; )
PPARG location ⇒ 13:56859046-56859357   CU856559,CH242-162G3,13:56821906-56932064
(Clone quality: bE162G3 on chr=13; Num_of_Contigs=2; )
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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