A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 25601 - 25700:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
1700028N11Rikb location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
ABCA7 location ⇒ 1:258113444-258113374   CU571367,CH242-482F3,1:257999449-258131842
(Clone quality: bE482F3 on chr=1; Num_of_Contigs=2; )
ABCA7 location ⇒ 1:258117692-258117631   CU571367,CH242-482F3,1:257999449-258131842
(Clone quality: bE482F3 on chr=1; Num_of_Contigs=2; )
ABCA7 location ⇒ 1:258137258-258137132   CU914248,CH242-220O11,1:258131843-258180962
(Clone quality: bE220O11 on chr=1; Num_of_Contigs=6; )
ABCA7 location ⇒ 1:258139703-258139653   CU914248,CH242-220O11,1:258131843-258180962
(Clone quality: bE220O11 on chr=1; Num_of_Contigs=6; )
ABCG1 location ⇒ 9:44984117-44984195   CU639481,CH242-263G17,9:44899832-45096295
(Clone quality: bE263G17 on chr=9; Num_of_Contigs=2; )
ABCG1 location ⇒ 9:44985078-44985145   CU639481,CH242-263G17,9:44899832-45096295
(Clone quality: bE263G17 on chr=9; Num_of_Contigs=2; )
ABCG1 location ⇒ 9:44988902-44988975   CU639481,CH242-263G17,9:44899832-45096295
(Clone quality: bE263G17 on chr=9; Num_of_Contigs=2; )
ABCG1 location ⇒ 9:44990859-44990987   CU639481,CH242-263G17,9:44899832-45096295
(Clone quality: bE263G17 on chr=9; Num_of_Contigs=2; )
ABL2 location ⇒ 1:286015959-286015845 FP102068,CH242-374C22,1:285992963-286044374
(Clone quality: bE374C22 on chr=1; Num_of_Contigs=5; ) 		 
ABL2 location ⇒ 1:286016896-286016833 FP102068,CH242-374C22,1:285992963-286044374
(Clone quality: bE374C22 on chr=1; Num_of_Contigs=5; ) 		 
ABL2 location ⇒ 1:286025237-286024979 FP102068,CH242-374C22,1:285992963-286044374
(Clone quality: bE374C22 on chr=1; Num_of_Contigs=5; ) 		 
ACSL1 location ⇒ 15:42967047-42967101   CU928824,CH242-353H16,15:42951275-42968693
(Clone quality: bE353H16 on chr=15; Num_of_Contigs=10; )
ACSL1 location ⇒ 15:42970342-42970398   CU928824,CH242-353H16,15:42968794-42972024
(Clone quality: bE353H16 on chr=15; Num_of_Contigs=10; )
ACSL1 location ⇒ 15:43226095-43226149   CU928291,CH242-45D7,15:43220738-43231454
(Clone quality: bE45D7 on chr=15; Num_of_Contigs=3; )
HIST2H3PS2   ENSSSCG00000006671 4:103198512-103198919   CU462833,CH242-167L20,4:103179974-103208836
(Clone quality: bE167L20 on chr=4; Num_of_Contigs=2; )
IMPG1   ENSSSCG00000004476 1:94830614-94841626    
IPO11   ENSSSCG00000016937 16:38964190-38997215   CU928415,CH242-96F6,16:38944729-39006442
(Clone quality: bE96F6 on chr=16; Num_of_Contigs=1; )
KCTD9   ENSSSCG00000009652 14:9572666-9635445    
KIF7   ENSSSCG00000001840 7:60468625-60474258   CT990467,CH242-141I20,7:60468381-60477408
(Clone quality: bE141I20 on chr=7; Num_of_Contigs=3; )
KPNA3   ENSSSCG00000009391 11:17813131-17838793    
KRTAP4-2   ENSSSCG00000017449 12:19112319-19137386    
LCE4A   ENSSSCG00000006600 4:100643912-100658399 CU076058,CH242-126J8,4:100634937-100826648
(Clone quality: bE126J8 on chr=4; Num_of_Contigs=7; ) 		 
LDOC1   ENSSSCG00000012718 X:113597135-113597575 FP101991,CH242-127F22,X:113576923-113597747
(Clone quality: bE127F22 on chr=X; Num_of_Contigs=5; ) 		 
LHX4   ENSSSCG00000015536 9:114353971-114354171   CU855640,CH242-212M8,9:114274421-114355557
(Clone quality: bE212M8 on chr=9; Num_of_Contigs=4; )
LRRC29   ENSSSCG00000002785 6:13340872-13343216   CU929920,CH242-351A16,6:13336930-13369049
(Clone quality: bE351A16 on chr=6; Num_of_Contigs=8; )
LRRC9   ENSSSCG00000005081 1:197709327-197868878    
MBD5   ENSSSCG00000015666 15:311581-366970    
MEIS1   ENSSSCG00000008355 3:69341513-69346048   CU929690,CH242-154E21,3:69239153-69346539
(Clone quality: bE154E21 on chr=3; Num_of_Contigs=3; )
MGAT5   ENSSSCG00000015701 15:15923089-16027655    
MORN1   ENSSSCG00000016109 15:98942043-98955370    
MTMR9   ENSSSCG00000003615 6:60897236-60898387   FP102820,CH242-217B19,6:60895272-60899183
(Clone quality: bE217B19 on chr=6; Num_of_Contigs=18; )
MUTED   ENSSSCG00000001028 7:5242226-5282891    
MYH6   ENSSSCG00000007616 3:5637226-5657612    
MYH7B   ENSSSCG00000007290 17:40467745-40472776    
MYO15A   ENSSSCG00000015941 15:71824819-71923011    
NALP2 ENSSSCG00000003277 6:40822524-40847765 CR853303,PigE-173F2,6:40799672-40950930
(No clone quality info on bT173F2) 		 
NBAS   ENSSSCG00000008620 3:113396698-113507557    
NCUBE1   ENSSSCG00000004320 1:60250503-60266665   CU929853,CH242-88I23,1:60235795-60273026
(Clone quality: bE88I23 on chr=1; Num_of_Contigs=7; )
NEB   ENSSSCG00000016397 15:133973904-134062152    
NFE2L3   ENSSSCG00000004333 1:61099173-61099418   CU311189,CH242-351M17,1:61036386-61117255
(Clone quality: bE351M17 on chr=1; Num_of_Contigs=2; )
NKTR   ENSSSCG00000011281 13:21920714-21932365   CU607093,CH242-384H20,13:21911604-21934179
(Clone quality: bE384H20 on chr=13; Num_of_Contigs=13; )
NR1D1   ENSSSCG00000017481 12:20078361-20079467   FP015991,CH242-327H5,12:20074847-20079877
(Clone quality: bE327H5 on chr=12; Num_of_Contigs=8; )
NR5A2   ENSSSCG00000010910 10:23687243-23820903    
OR1C1   ENSSSCG00000013843 2:60460056-60460997   CU942397,CH242-289F11,2:60459875-60461992
(Clone quality: bE289F11 on chr=2; Num_of_Contigs=10; )
OR1K1   ENSSSCG00000017856 12:46781501-46782481   CU928027,CH242-267M13,12:46741898-46796451
(Clone quality: bE267M13 on chr=12; Num_of_Contigs=5; )
OR3A1   ENSSSCG00000017851 12:46690961-46691905   CU928027,CH242-267M13,12:46647678-46730556
(Clone quality: bE267M13 on chr=12; Num_of_Contigs=5; )
PAX2   ENSSSCG00000010557 14:116881618-116903070   CT737251,CH242-61D9,14:116829687-116905803
(Clone quality: bE61D9 on chr=14; Num_of_Contigs=5; )
PHF20   ENSSSCG00000007311 17:41315754-41385404    
PJA2   ENSSSCG00000014194 2:102853440-102856104   CU466452,CH242-234F21,2:102848628-102887724
(Clone quality: bE234F21 on chr=2; Num_of_Contigs=6; )
PLD5   ENSSSCG00000010867 10:15353365-15364941    
POLR2B   ENSSSCG00000008895 8:46763319-46765269   CU928435,CH242-246B14,8:46750554-46766843
(Clone quality: bE246B14 on chr=8; Num_of_Contigs=16; )
POLR2J   ENSSSCG00000007688 3:8222507-8225133    
POLR2J2   ENSSSCG00000003703 6:73195652-73195999   CU463086,CH242-380B10,6:73175305-73240038
(Clone quality: bE380B10 on chr=6; Num_of_Contigs=6; )
PRPS1   ENSSSCG00000012560 X:86170932-86197041   FP074898,CH242-294L14,X:86138982-86203202
(Clone quality: bE294L14 on chr=X; Num_of_Contigs=4; )
PRRG1   ENSSSCG00000012225 X:32731785-32732267 CU928355,CH242-280I8,X:32692574-32732731
(Clone quality: bE280I8 on chr=X; Num_of_Contigs=8; ) 		 
PRSS22   ENSSSCG00000008062 3:37096171-37147278    
PRSS27   ENSSSCG00000008059 3:36981166-37007501    
PTPN3   ENSSSCG00000005449 1:263189632-263223249   CU627995,CH242-236N5,1:263188502-263225702
(Clone quality: bE236N5 on chr=1; Num_of_Contigs=7; )
RBM14   ENSSSCG00000012937 2:4183174-4184600    
RFC1   ENSSSCG00000008788 8:25998196-26032656    
RNF217   ENSSSCG00000004227 1:39434595-39531471    
RNGTT   ENSSSCG00000004311 1:59723829-59871609    
RPLP1   ENSSSCG00000007065 17:19404287-19404598   CU914520,CH242-71M21,17:19394313-19406514
(Clone quality: bE71M21 on chr=17; Num_of_Contigs=7; )
RPS10L   ENSSSCG00000001528 7:34928659-34936021   CU468519,CH242-151L19,7:34915385-34944267
(Clone quality: bE151L19 on chr=7; Num_of_Contigs=11; )
RPS4P21   ENSSSCG00000016240 15:119908978-119909729   CU694832,CH242-176E14,15:119858295-119931879
(Clone quality: bE176E14 on chr=15; Num_of_Contigs=6; )
RPS6   ENSSSCG00000005209 1:226439078-226440062   CU457399,CH242-185B23,1:226415512-226461501
(Clone quality: bE185B23 on chr=1; Num_of_Contigs=9; )
SET   ENSSSCG00000005656 1:283731663-283744686    
SETD8   ENSSSCG00000009777 14:29690784-29703678    
SNRNP200   ENSSSCG00000004358 1:70749012-70810129    
SNRPB   ENSSSCG00000011966 13:116604487-116605242   CU861635,CH242-475E6,13:116604478-116619240
(Clone quality: bE475E6 on chr=13; Num_of_Contigs=6; )
SQRDL   ENSSSCG00000004665 1:131676579-131732409    
SYCP2L   ENSSSCG00000001044 7:7993408-7996762   CU407176,CH242-253P8,7:7972581-8004189
(Clone quality: bE253P8 on chr=7; Num_of_Contigs=5; )
SYCP3   ENSSSCG00000000863 5:77869294-77877570   CU928944,CH242-147F20,5:77866870-77879539
(Clone quality: bE147F20 on chr=5; Num_of_Contigs=9; )
SYNE1   ENSSSCG00000004082 1:15004138-15163032    
TARS   ENSSSCG00000016817 16:16965835-16979132    
TBX15   ENSSSCG00000006725 4:106185873-106224591   CU302242,CH242-216F15,4:106185124-106285939
(Clone quality: bE216F15 on chr=4; Num_of_Contigs=3; )
TCOF1   ENSSSCG00000014450 2:136877104-136888949    
THNSL2   ENSSSCG00000008210 3:52642854-52647908   CU856068,CH242-8G4,3:52642142-52651827
(Clone quality: bE8G4 on chr=3; Num_of_Contigs=15; )
TMEFF2   ENSSSCG00000016064 15:91367270-91385182   CU693393,CH242-174B17,15:91344837-91454554
(Clone quality: bE174B17 on chr=15; Num_of_Contigs=2; )
TNN   ENSSSCG00000015507 9:110166502-110181048   CU951453,CH242-234C7,9:110161289-110189861
(Clone quality: bE234C7 on chr=9; Num_of_Contigs=6; )
TOMM22   ENSSSCG00000000100 5:5675881-5677878    
TRBV12-2   ENSSSCG00000016476 18:6315989-6316447   CU655925,CH242-295C16,18:6314137-6332863
(Clone quality: bE295C16 on chr=18; Num_of_Contigs=15; )
UBR3   ENSSSCG00000015939 15:71579984-71648113    
UQCRC2   ENSSSCG00000007843 3:21807624-21819975   CU694800,CH242-3C2,3:21807149-21832805
(Clone quality: bE3C2 on chr=3; Num_of_Contigs=12; )
UTRN   ENSSSCG00000004123 1:21499955-21561156   FP102247,CH242-291A23,1:21437550-21569411
(Clone quality: bE291A23 on chr=1; Num_of_Contigs=2; )
VAX1   ENSSSCG00000010666 14:133133178-133137157   CU468444,CH242-75D17,14:133112192-133143808
(Clone quality: bE75D17 on chr=14; Num_of_Contigs=6; )
ZBTB41   ENSSSCG00000010898 10:21276749-21277873   CU914732,CH242-381C11,10:21270066-21286256
(Clone quality: bE381C11 on chr=10; Num_of_Contigs=11; )
ZC3H7A   ENSSSCG00000007891 3:28003782-28010326    
ZCCHC3   ENSSSCG00000007211 17:36818972-36820180   CU606854,CH242-254I19,17:36811565-36835886
(Clone quality: bE254I19 on chr=17; Num_of_Contigs=11; )
ZDHHC16   ENSSSCG00000008763 8:18135852-18136981   CU915642,CH242-24H19,8:18114763-18139537
(Clone quality: bE24H19 on chr=8; Num_of_Contigs=2; )
ZFHX2   ENSSSCG00000002017 7:81906428-81907345   CU468006,CH242-243D20,7:81897369-81907469
(Clone quality: bE243D20 on chr=7; Num_of_Contigs=16; )
ZFP1   ENSSSCG00000008670 3:123224090-123235801    
ZFP36L2   ENSSSCG00000008461 3:90710274-90712592   CU928663,CH242-315B8,3:90710082-90712784
(Clone quality: bE315B8 on chr=3; Num_of_Contigs=3; )
ZFP37   ENSSSCG00000005475 1:266624371-266651311   CU856416,CH242-238G19,1:266606746-266683092
(Clone quality: bE238G19 on chr=1; Num_of_Contigs=3; )
ZNF358   ENSSSCG00000006960 4:136146478-136152838   FP085504,CH242-211G21,4:136139098-136254946
(Clone quality: bE211G21 on chr=4; Num_of_Contigs=4; )
ZNF394   ENSSSCG00000007620 3:5775707-5776748   FP102617,CH242-199P18,3:5759765-5834782
(Clone quality: bE199P18 on chr=3; Num_of_Contigs=6; )
ZNF449   ENSSSCG00000012691 X:109035791-109037000   CU928850,CH242-30L9,X:109022630-109046918
(Clone quality: bE30L9 on chr=X; Num_of_Contigs=6; )
ZNF490   ENSSSCG00000013718 2:55649769-55654446   CU929470,CH242-87N8,2:55649125-55654463
(Clone quality: bE87N8 on chr=2; Num_of_Contigs=25; )
ZNF594   ENSSSCG00000017897 12:48967520-48986224    
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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