A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 2501 - 2600:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
CD ENSSSCG00000000662 5:59228332-59239308    
CD ENSSSCG00000002997 6:33691277-33692709   CU928654,CH242-130A3,6:33678287-33731769
(Clone quality: bE130A3 on chr=6; Num_of_Contigs=6; )
CDC2 ENSSSCG00000003216 6:39000770-39015171   FP102476,CH242-133P5,6:39000388-39018494
(Clone quality: bE133P5 on chr=6; Num_of_Contigs=12; )
CDC2 ENSSSCG00000004395 1:79254002-79301990    
CDC2 ENSSSCG00000005505 1:273948158-273990224    
CDC2 ENSSSCG00000010214 14:66845794-66860895   CU468520,CH242-402M7,14:66758226-66885237
(Clone quality: bE402M7 on chr=14; Num_of_Contigs=3; )
CDC2 ENSSSCG00000010216 14:67060275-67070840    
CDC2 ENSSSCG00000015888 15:62431468-62702311    
CDC2 ENSSSCG00000016769 18:53180959-53272992    
CDC2 ENSSSCG00000017504 12:20737886-20792069    
CDC23   ENSSSCG00000014325 2:127173318-127191686   CU928408,CH242-232M5,2:127160377-127220355
(Clone quality: bE232M5 on chr=2; Num_of_Contigs=3; )
CDC25B   ENSSSCG00000007151 17:33603414-33610819   FP236531,CH242-39P18,17:33601318-33612018
(Clone quality: bE39P18 on chr=17; Num_of_Contigs=7; )
CDC25C   ENSSSCG00000014329 2:127265827-127301541   CU928408,CH242-232M5,2:127227830-127327871
(Clone quality: bE232M5 on chr=2; Num_of_Contigs=3; )
CDC27   ENSSSCG00000017308 12:14557060-14672909    
CDC2L2   ENSSSCG00000003352 6:43074485-43088851    
CDC2L5   ENSSSCG00000016769 18:53180959-53272992    
CDC2L6   ENSSSCG00000004395 1:79254002-79301990    
CDC37   ENSSSCG00000013647 2:53103702-53113916   CU928523,CH242-307C2,2:53096041-53119307
(Clone quality: bE307C2 on chr=2; Num_of_Contigs=9; )
CDC37L1   ENSSSCG00000005219 1:227366662-227390353   CU467061,CH242-40P15,1:227339625-227392310
(Clone quality: bE40P15 on chr=1; Num_of_Contigs=2; )
CDC40   ENSSSCG00000004403 1:79796035-79848271    
CDC42 ENSSSCG00000003520 6:55114231-55133985   CU633957,CH242-4G23,6:55111766-55183249
(Clone quality: bE4G23 on chr=6; Num_of_Contigs=4; )
CDC42BPA   ENSSSCG00000010862 10:14490153-14686726    
CDC42BPG   ENSSSCG00000013018 2:5734333-5752406 FP101995,CH242-228D7,2:5725813-5761270
(Clone quality: bE228D7 on chr=2; Num_of_Contigs=13; ) 		 
CDC42EP2 ENSSSCG00000012996 2:5298971-5299615   CU856029,CH242-276E8,2:5292491-5308091
(Clone quality: bE276E8 on chr=2; Num_of_Contigs=9; )
CDC42EP3   ENSSSCG00000008490 3:95647554-95648318   CU856694,CH242-232D5,3:95617551-95695660
(Clone quality: bE232D5 on chr=3; Num_of_Contigs=2; )
CDC42EP4   ENSSSCG00000017245 12:5769195-5770268 CU929672,CH242-62J22,12:5703604-5857364
(Clone quality: bE62J22 on chr=12; Num_of_Contigs=4; ) 		 
CDC42EP5   ENSSSCG00000003274 6:40729599-40729913   CU914171,CH242-113P17,6:40726223-40729915
(Clone quality: bE113P17 on chr=6; Num_of_Contigs=7; )
CDC42SE1   ENSSSCG00000006638 4:102126950-102133468   CU459198,CH242-258B14,4:102107604-102144873
(Clone quality: bE258B14 on chr=4; Num_of_Contigs=7; )
CDC42SE2   ENSSSCG00000014266 2:121411617-121514265    
CDC45L ENSSSCG00000010122 14:52244529-52269749   CU468637,CH242-526M15,14:52233729-52290922
(Clone quality: bE526M15 on chr=14; Num_of_Contigs=13; )
CDC5L   ENSSSCG00000001708 7:45906188-45949646 CR956370,CH242-181F19,7:45890645-46067290
(No clone quality info on bE181F19) 		 
CDC6   ENSSSCG00000017471 12:19750959-19764757    
CDC73   ENSSSCG00000010801 10:1623870-1649597   CU929655,CH242-497M20,10:1621464-1649831
(Clone quality: bE497M20 on chr=10; Num_of_Contigs=12; )
CDCA2   ENSSSCG00000009653 14:9636872-9684424   CU041332,CH242-35P19,14:9599147-9818169
(Clone quality: bE35P19 on chr=14; Num_of_Contigs=1; )
CDCA3   ENSSSCG00000000683 5:59889344-59891707   CU457492,CH242-370K21,5:59880009-59901315
(Clone quality: bE370K21 on chr=5; Num_of_Contigs=10; )
CDCA4   ENSSSCG00000002559 7:133225520-133226158   CU695123,CH242-103I13,7:133218893-133234990
(Clone quality: bE103I13 on chr=7; Num_of_Contigs=13; )
CDCA5   ENSSSCG00000013008 2:5504232-5509330 CU457406,CH242-284K16,2:5352106-5575890
(Clone quality: bE284K16 on chr=2; Num_of_Contigs=20; ) 		 
CDCA7   ENSSSCG00000015961 15:74393186-74406634    
CDCP1 ENSSSCG00000011298 13:23480639-23512665    
CDGAP   ENSSSCG00000011902 13:105601126-105746664    
CDH10 ENSSSCG00000016802 16:11068482-11179497    
CDH11 ENSSSCG00000002795 6:14546161-14596703    
CDH12 ENSSSCG00000016799 16:9383414-9692211    
CDH13 ENSSSCG00000002684 6:3169764-3320214    
CDH15 ENSSSCG00000002642 6:312204-320834   FP102614,CH242-198I21,6:311914-324297
(Clone quality: bE198I21 on chr=6; Num_of_Contigs=22; )
CDH17 ENSSSCG00000006106 4:43120544-43202644    
CDH18 ENSSSCG00000016797 16:7815329-7816379   CU466489,CH242-446L4,16:7813634-7841882
(Clone quality: bE446L4 on chr=16; Num_of_Contigs=18; )
CDH19 ENSSSCG00000004885 1:162620292-162680496    
CDH2 ENSSSCG00000003722 6:77952628-77983828    
CDH20 ENSSSCG00000004903 1:166681872-166740372    
CDH22 ENSSSCG00000007439 17:50349566-50372213    
CDH23 ENSSSCG00000010278 14:77772954-77915348    
CDH24 ENSSSCG00000002037 7:82382731-82390566   CU468526,CH242-14D10,7:82382718-82403264
(Clone quality: bE14D10 on chr=7; Num_of_Contigs=8; )
CDH26 ENSSSCG00000003725 6:79638557-79642691   CU914455,CH242-81E19,6:79634463-79647148
(Clone quality: bE81E19 on chr=6; Num_of_Contigs=29; )
CDH29   ENSSSCG00000011391 13:27081523-27088230   CU914539,CH242-222N14,13:27078304-27105846
(Clone quality: bE222N14 on chr=13; Num_of_Contigs=2; )
CDH3 ENSSSCG00000002642 6:312204-320834   FP102614,CH242-198I21,6:311914-324297
(Clone quality: bE198I21 on chr=6; Num_of_Contigs=22; )
CDH6 ENSSSCG00000016806 16:15506044-15560738   FP003585,CH242-122L12,16:15492559-15575994
(Clone quality: bE122L12 on chr=16; Num_of_Contigs=5; )
CDH7 ENSSSCG00000004885 1:162620292-162680496    
CDH7 ENSSSCG00000004886 1:163217352-163297550    
CDH7 ENSSSCG00000004903 1:166681872-166740372    
CDK2 ENSSSCG00000000373 5:20332627-20338207    
CDK2 ENSSSCG00000005047 1:192401013-192415532    
CDK2 ENSSSCG00000009775 14:29587767-29593976   CU462966,CH242-408L13,14:29576419-29594527
(Clone quality: bE408L13 on chr=14; Num_of_Contigs=11; )
CDK2 ENSSSCG00000012902 2:3406772-3408962   CU633429,CH242-6G2,2:3403551-3456026
(Clone quality: bE6G2 on chr=2; Num_of_Contigs=8; )
CDK2 ENSSSCG00000016835 16:18868174-18905906 CU856110,CH242-36H10,16:18824515-19007053
(Clone quality: bE36H10 on chr=16; Num_of_Contigs=2; ) 		 
CDK2AP1   ENSSSCG00000009775 14:29587767-29593976   CU462966,CH242-408L13,14:29576419-29594527
(Clone quality: bE408L13 on chr=14; Num_of_Contigs=11; )
CDK2AP2   ENSSSCG00000012902 2:3406772-3408962   CU633429,CH242-6G2,2:3403551-3456026
(Clone quality: bE6G2 on chr=2; Num_of_Contigs=8; )
CDK3 ENSSSCG00000003705 6:73661712-73753577    
CDK3 ENSSSCG00000007540 17:64006676-64018123    
CDK3 ENSSSCG00000017193 12:3785816-3789490   CU928029,CH242-304M1,12:3750666-3894443
(Clone quality: bE304M1 on chr=12; Num_of_Contigs=9; )
CDK4 ENSSSCG00000000445 5:21901907-21902707   CU914582,CH242-235E14,5:21901770-21904026
(Clone quality: bE235E14 on chr=5; Num_of_Contigs=33; )
CDK4 ENSSSCG00000005132 1:209499306-209529714    
CDK5 ENSSSCG00000001080 7:16620234-17280446    
CDK5 ENSSSCG00000003705 6:73661712-73753577    
CDK5 ENSSSCG00000005505 1:273948158-273990224    
CDK5R1   ENSSSCG00000017730 12:40183369-40184292   CU695029,CH242-169J22,12:40003526-40192006
(Clone quality: bE169J22 on chr=12; Num_of_Contigs=1; )
CDK5RAP1   ENSSSCG00000007264 17:38797699-38831219    
CDK5RAP2   ENSSSCG00000005505 1:273948158-273990224    
CDK5RAP3   ENSSSCG00000017524 12:21680618-21683032   CU681834,CH242-505F23,12:21678954-21683281
(Clone quality: bE505F23 on chr=12; Num_of_Contigs=26; )
CDK6 ENSSSCG00000015318 9:67905086-68226459    
CDK7 ENSSSCG00000005090 1:198435585-198751937    
CDK7 ENSSSCG00000016961 16:44731126-44757008    
CDK8   ENSSSCG00000009298 11:3128530-3237839    
CDK9   ENSSSCG00000005621 1:282627917-282639414    
CDKAL1   ENSSSCG00000001080 7:16620234-17280446    
CDKL1   ENSSSCG00000005018 1:188456686-188471840    
CDKL2   ENSSSCG00000008970 8:60746412-60763868    
CDKL4   ENSSSCG00000008477 3:94143560-94216572    
CDKL5   ENSSSCG00000012156 X:14571908-14656656   FP085429,CH242-362P2,X:14496883-14657415
(Clone quality: bE362P2 on chr=X; Num_of_Contigs=3; )
CDKN1A ENSSSCG00000001565 7:36987622-36995484 CU326356,CH242-61G11,7:36975834-37183903
(Clone quality: bE61G11 on chr=7; Num_of_Contigs=4; ) 		 
CDKN1A ENSSSCG00000005640 1:283255579-283275705    
CDKN1A ENSSSCG00000010743 14:142126292-142138279   CT841550,CH242-252A14,14:142117451-142165612
(Clone quality: bE252A14 on chr=14; Num_of_Contigs=5; )
CDKN1A ENSSSCG00000014878 9:11710480-11791400    
CDKN2A ENSSSCG00000005134 1:209529377-209532177   CU915634,CH242-510N24,1:209528899-209535205
(Clone quality: bE510N24 on chr=1; Num_of_Contigs=8; )
CDKN2A ENSSSCG00000014300 2:124454245-124462131   CU570753,CH242-461C23,2:124437899-124463515
(Clone quality: bE461C23 on chr=2; Num_of_Contigs=12; )
CDKN2A ENSSSCG00000015779 15:42097166-42100256   CU694719,CH242-351H16,15:42082383-42103959
(Clone quality: bE351H16 on chr=15; Num_of_Contigs=9; )
CDKN2AIP   ENSSSCG00000015779 15:42097166-42100256   CU694719,CH242-351H16,15:42082383-42103959
(Clone quality: bE351H16 on chr=15; Num_of_Contigs=9; )
CDKN2AIPNL   ENSSSCG00000014300 2:124454245-124462131   CU570753,CH242-461C23,2:124437899-124463515
(Clone quality: bE461C23 on chr=2; Num_of_Contigs=12; )
CDKN2B ENSSSCG00000005132 1:209499306-209529714    
CDKN2C ENSSSCG00000003876 6:114985843-114990244   FP015924,CH242-136C1,6:114963846-114998258
(Clone quality: bE136C1 on chr=6; Num_of_Contigs=9; )
Go to records:
1-100

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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